Gene Pnap_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4028 
Symbol 
ID4690006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4294144 
End bp4294674 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content64% 
IMG OID639837042 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_984241 
Protein GI121606912 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.636645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTG ATCAACGCTT CAGGAGACAC GAAATGACCA GCAAGAACAC GATCTGTCTG 
TGGTACGAGG GCGGCGCCGT TGACGCCGCG AACTTCTATG CCCAGACTTT CCCCGACAGC
GCCGTCGGCG CCGTCCTCCG CGCCCCGGGC GACTATCCCG ACGGCAAGCA GGGCGATGTC
CTGACGGTCG AGTTCACCGT CGCCGGAATC CCCTGCATCG GGCTGAACGG CGGCCCGCAC
TTCAAGCACA GCGAGGCCTT CTCTTTTCAA ATCGCGACCG ACGACCAGCT TGAGACCGAC
CGCTTGTGGA ACGCGGTCGT CGGCAATGGC GGCCAGGAAA GCGCGTGCGG CTGGTGCAAG
GACCGATGGG GCCTGTCATG GCAGATCACC CCGCGCGCCC TCACCACGGC GCTGTCCGGC
CCTGATCGTG CGGCGGCCAA GCGCGTGTTC GACGCGATGA TGAGCATGAA AAAGATCGAC
ATCGCCGCGA TAGAGGCGGC ACGGCTGGGC CAAAATCTAT CCTCAAGTTG A
 
Protein sequence
MPGDQRFRRH EMTSKNTICL WYEGGAVDAA NFYAQTFPDS AVGAVLRAPG DYPDGKQGDV 
LTVEFTVAGI PCIGLNGGPH FKHSEAFSFQ IATDDQLETD RLWNAVVGNG GQESACGWCK
DRWGLSWQIT PRALTTALSG PDRAAAKRVF DAMMSMKKID IAAIEAARLG QNLSSS