| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3926 |
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| Symbol | |
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| ID | 4689521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4189958 |
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| End bp | 4191550 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639836944 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_984143 |
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| Protein GI | 121606814 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.201951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000100344 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAG TCTTACTCTT TTCCAAAGAT TTCGCTGATC AGGGAGGTGA TAAATACTAT
ATTTGGAACA ATCAAAACTT AACTGAAAAA TCGGCAGCGG AAATATGTGA TGAAAATGAC
CAAATTATTT GTCATGATTA CTGGTTAATT GCTCCAAGCA TCGTAAAAAA GGAATGTCGA
TTACCATGTA ATGTCATTGA CATCCATGAA TTTAGTATTG CAATATCGGG AATAAAGCAA
AACCGAAAAA TTCGTGAACG TGGAGAAATC CGCGATTTTC TAAAGAAAAT ACCAAAGATA
GCGCACCTAG AAGCAGAAGC AGAAGCAGAA GCAGAAGCAG AAGCAGCAAC CATATCAGCT
TACTTAGATA TTTTTTACAA GAAAAAACCA CTGAATTTGC AAATTTTGAC TGATGTGGCC
AAAATAATTC AAGTTCGATG GCTAGAACTC GAAAAGCTTG CTGAATCTCT TGGGGAGCTT
CAAAGACAGA ATGAGGTTGA AATTCCGATC TTTAACATTC TTCATAAAAA CATTACACCC
GGTATTAGAA TAAATCAAGA AAATCTAAGA GAGCATAAAA AAGATATCGA ATACGAATAC
TACAAGACGC TTAAGGATTT CTCCAATAAA TATGATCTTC CACTTGAAGA TCCTAACGAT
CAAACCGTTA TAGATTATCT AGAATATCGA GATTTTGATT TCTCAGGTAT TTCTGTTGAT
TATATGTTGC AGTTTGTTCC CACTCCTGAT GGCTTCGCAG AAGCTGTAAT CAATTTAAGA
AAAATAAGTG CATCCCGACA TCTACTTTCT GCTCTAACTT TATCAAAAAA ATACTCAACC
CCTGTAATTG ACTTGTTCGG CTCGATAACT TCAAGAATTT ACTTTAAAGA TCCAGTATTT
CAAAATATAT CTAAACGGCA TCGCGATGTT ATTTGTCCAA ATGGAAGCAA TTTATTGTCG
TACGTGGATT ACGATCAATT TGAAGTTGGG GTAATGGCAG CGCTTTCTGA GGATGAAATA
TTGCTTTCAC TATACTCAGG AGAAGACCTA TACGAATCAC TTTTAGAGCA ATTATTCGGT
GAAAAAAATC AAAGAAAGTT TGCAAAAAGG CTCTTCCTTT CTTATGCATA CGGAATGAAA
TTAAATAGAA TTTCCGATGC CGCACATGCT AAAGGTGTTG AAAGGGGAAA AGTAAAGGAA
TTTTTTCGGA AACTTACAAC CTTTGAAAAA TGGAAGGCAG ATTTGCAAGA ACAATTCCAT
AAGAATGGAT GCATCAGCAC TTCAGAGGGT AATTTTCTTA GGAGAAATGT CACTGGCCAG
CTATCAGAAA AGGAAAAAAG ATCCTGCATT AGTCAAGTTG TACAAGGGAC TGCCTCTCTA
ATCTTCAAAA AGGCTCTCCT TGCTCTGGAT AAGATAGATG GGTTTCGCAT ACTTGTACCT
ATGCACGATG CTGTACTGGT TGAGCATTCA GCCCACCTCG ATCCCGCGTT ATTAGTAGAT
GTTTTCAGTC AAGTTATGAC AGATCACTTT GGGGGAAAAA TAAAAGGCAA AGCTTCTTTA
GAGAAGTTTT TTTTGCCCAA GGTTGGAAAC TAA
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| Protein sequence | MKKVLLFSKD FADQGGDKYY IWNNQNLTEK SAAEICDEND QIICHDYWLI APSIVKKECR
LPCNVIDIHE FSIAISGIKQ NRKIRERGEI RDFLKKIPKI AHLEAEAEAE AEAEAATISA
YLDIFYKKKP LNLQILTDVA KIIQVRWLEL EKLAESLGEL QRQNEVEIPI FNILHKNITP
GIRINQENLR EHKKDIEYEY YKTLKDFSNK YDLPLEDPND QTVIDYLEYR DFDFSGISVD
YMLQFVPTPD GFAEAVINLR KISASRHLLS ALTLSKKYST PVIDLFGSIT SRIYFKDPVF
QNISKRHRDV ICPNGSNLLS YVDYDQFEVG VMAALSEDEI LLSLYSGEDL YESLLEQLFG
EKNQRKFAKR LFLSYAYGMK LNRISDAAHA KGVERGKVKE FFRKLTTFEK WKADLQEQFH
KNGCISTSEG NFLRRNVTGQ LSEKEKRSCI SQVVQGTASL IFKKALLALD KIDGFRILVP
MHDAVLVEHS AHLDPALLVD VFSQVMTDHF GGKIKGKASL EKFFLPKVGN
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