| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3901 |
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| Symbol | |
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| ID | 4689828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4164947 |
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| End bp | 4166137 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639836919 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_984118 |
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| Protein GI | 121606789 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.843954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.11743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC CCTCTGCCAA GTCCGTCATC GTCGCCGCCA TCGCCGTGCT GGCCATCGCT
GCAGGCGCTT ACTTTGTCAC CTCCAGCCCG CGTGATTCAA CCGCAGCCAG CCCGCCCAAG
GCCGCGCCCA AGCCCGCGCT GACCGTGACC GCCGCCCTGC CCGAATCGAC CCGCTTGGCC
GTCACGCTGG CGGCCAACGG CAACATCGCC GCCTGGCAGG AAGCCGTCAT CGGCGCCGAG
TCAAGCGGCC TGCGGCTGAC CGAGGTGCGC GTCAACGTCG GCGACGTGGT CAAGGCCGGC
CAGGTGCTGG CGACGTTTTC GACGGACAGC GTGCAGGCCG ACGTGGCGCA GGCGCGCGCC
AGCCTGCTGG AGGCGCAGGC CAACGCGGCC GATGCCGCCG CCAATGCCGA ACGCGCGCGC
AGCCTGCAAA GCTCGGGCGC GCTGAGCGCC CAGCAGATCA ACCAGTATTT AACGCTTGAG
AAAACCGCCA AAGCGCGCGC CGAAGCCGCG CAGGCGGTGC TCGGCGCGCA GCAGTTGCGC
GGCCGCCAGA CGCAGGTGCT GGCGCCCGAC AGCGGCGTGA TCTCGGCGCG CAGCGCCACC
GTGGGCGCGG TCGTCGGCAA CGGCGCCGAG CTGTTTCGCA TGATCCGCCA GGGCCGGCTG
GAGTGGCGCG CCGAAGTGAC CTCCAGCGAA CTGGGCCGGA TCAGGGAAGG CCTGCCGGTC
AGCGTGACTC CAGCCAGCGG CGGCGAACTG CGCGGGCGCG TGCGCATGCT CGCGCCCAGC
GTCGATCCGT TGACGCGCTC GGCGCTGGTG TATGTCGATC TGCCCTCGGC CGCCAGCAAG
GGCTCGACCG CCAGGGCCGG CATGTTTGCG CGCGGCGAGT TTGACCTGGG CGCGTCCACC
TCGCTGACCA TTCCCCAGCG CGCGCTGGTG GTGCGCGACG GCTTCAACTA CGTGTTCCGG
CTGGGCGACG GCAACCGCGT CAGCCAGCTC AAGGTGCAGA CCGGGCGGCT GGCCGGCGAG
CGCATCGAAG TCGTCTCGGG CCTGCCAGCG GATGCGCGCA TCGTCGTCAA CGGCGCGGGC
TTCCTGAATG ACGGCGATCT GGTGCGGATT AGTCAGGAAA ATGAATCAAA TCAGACTCCT
GCGCAGGCTG CATCAGCGCA AACAGCTATC AAAGAAGGAG CAAACCCATG A
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| Protein sequence | MNKPSAKSVI VAAIAVLAIA AGAYFVTSSP RDSTAASPPK AAPKPALTVT AALPESTRLA
VTLAANGNIA AWQEAVIGAE SSGLRLTEVR VNVGDVVKAG QVLATFSTDS VQADVAQARA
SLLEAQANAA DAAANAERAR SLQSSGALSA QQINQYLTLE KTAKARAEAA QAVLGAQQLR
GRQTQVLAPD SGVISARSAT VGAVVGNGAE LFRMIRQGRL EWRAEVTSSE LGRIREGLPV
SVTPASGGEL RGRVRMLAPS VDPLTRSALV YVDLPSAASK GSTARAGMFA RGEFDLGAST
SLTIPQRALV VRDGFNYVFR LGDGNRVSQL KVQTGRLAGE RIEVVSGLPA DARIVVNGAG
FLNDGDLVRI SQENESNQTP AQAASAQTAI KEGANP
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