Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3784 |
Symbol | |
ID | 4686987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4034501 |
End bp | 4036828 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639836802 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_984001 |
Protein GI | 121606672 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0161451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACGG TCAGCCTGTC ACCTCTTTCC CTGTCCCCAT CGAGCCTGCC GGGCGCAGCG GTCAATTCCA CGCCGCTGGC GATGCTCGAT GATCCGCACG AATGGTCAGC CTTCAGCCGC TCCCTGGCCG CGCAGCCTTC CTGCTGGGAA TCCAGCGTGG TGTTCGAAGG CATGCATTGC GCGGCCTGCG CGCTCACCAT TGAAGATGCC TTGCGCCGTG TGCCGGGCGT GCTGTCGGCG GACGTCAGCG CGGCCAGCCA TCGCGGCCGC ATTGTCTGGT CGGACCAGGC CATCAAGCCG TCCGGCTGGA TGCAGGCTGC CGCCCGCGCC GGCTACCCGG CCGTGCCCGC CAACGATGCC TTTGCCAACG ACCGCCGGCG TGTCGAAACG CGCCAGGTGC TGTGGCGCCT GGGTGTGGCC GGCATGTGCA TGATGCAGGT GATGATGTAT GCATGGCCGG CCTATGTGGC CGATCCGGGC GACCTGGCGC CTGACATGGC GCAGTTGCTG CGCTGGGCTT CGTGGGTGCT TTCGCTGCCG GTGCTGCTGT TTTCCTGCGC GCCTTTTTTC CGCAATGCGC TGCGCGACCT GCGCCACCGG CGCGTCAGCA TGGACCTGCC GGTGGCGCTG GGCATGGGAA TTACCTTTGT CGTGAGTTCC CTGGGAACCT TCGAGCCCAA CGGGATTTTC GGCGCCGAAG TGTATTTCGA CTCCTTCACC ATGTTTGTGT TTTTCCTGCT GACCGGGCGC TGGCTGGAAT TGCGCCTGCG CGACCGCACC GCAGGGGCGC TCGAAGCGCT GATGAACCGT CTGCCCGACA GTGTGGAGCG GCGCGGCGCC GACGGTGTCT TCGAGCGCGT GGCGGTGCGC CGGCTCAGCG CGGGCGATGT GATACGGGTG CTGCCAGGCG AGGCTTTTCC GGCCGACGGC TTCATTCTGG AAGGCAGCAC ATTGGCTGAT GAATCGCTGC TGACGGGTGA ATCACGACCC CTGCCGCGCG GCAAGGGCGG CATCGTGATC GCCGGCAGCC ACAATCTTTC TGCCCCCGTC GTTGTGCAGG TTGAGCTGAC CGGGAGCGAA ACGCGGTTTG CCCAGATTGT GGCGCTGATG GAAAGCGCTT CGACCTCCAA GCCGAAACTG GCGCAGCTGG CGGACCGCAT TGCCAAGCCA TTCCTTGTTT TCGTCCTGCT GGCTGCCGGC GGCGCCGGCG CCTACTGGTG GTCGCATGAC CCGGGCCATG CGCTGATGGT GGCGGTGGCC GTCCTGATCG TGACCTGTCC CTGTGCGCTG TCGCTCGCCA CGCCGGCGGC CATGCTCGCC AGCGCCGGAG CCCTGGCGCG CAACGGCGTA CTGGTCCGGC GCCTGCAGGC GCTGGAAGCC ATGGCCAGCG TGGATGCGGT GGTGTTCGAC AAGACCGGCA CCCTGACGCG CGATGCGTTT GCGCTCGGCG AGGTGCATAC CCGCGAAGGC GTTTCAAAAG ACAATGCCTT GGCCATGGCC GCCGCGCTGG CGCAGCACTC GCTGCATCCG GTGTCGCGCG CGCTGGTCGC GGCCGGGCAG GGCGATGCCT TGCAGCACGA CGCCTGGGTC GTGCAGGAGG CCCACGAAAC CGCCGGCCAG GGTGTATCGG GCCGTCTTTG CATTCACGGC AGGCCGGCGT CCGCCGTCAT GGCGCGACTG GGCTCGGCCC GGTTTTGCGA TGTGGCTGCG CCCGCTACGC CAGCGCTGCA TGCGTGCCTG AGCGACGAGC AAGGCTGGAT CGCCACCTTT GAATTGCAGG AAGACTTGCG CCCTGACGCC CATGCCACCG TGGCTTCGTT GACGGCCCAG GGCGTACAGG TCTATCTGCT CTCGGGCGAC CTGCCCGAAT CCGCCGCCCG CGTTGCCCGT CAAGCCGGCA TCAACCACGC CCGGGGCGGC TGCACGCCAC AGGACAAACT CGCCTTCCTG CGCGGCCTGC AGTCGCAGGG CCACAAGGTT GCCATGGTGG GCGATGGCCT GAACGACGGC CCGGTTCTGG CGGGAGCCCA TGTGTCGTTT GCCTTTGGGC AGGCGGTGCC TCTGGCACAG GCGCAATCCG ACCTGGTCGT CCTGGGTGAC CGGCTGGGCA GCGTGGCGCA AACCTTATTT CAGGCGCGGC GCACTTTCGT CATCATCCGT AAGAATTTGT GGGGGTCCGC TATTTACAAT GCCGTCTGCG TGCCCCTGGC TGTGTTTGGC TGGTTGCCAG CCTGGCTGGC CGGACTGGGC ATGGCGCTCA GTTCACTGCT GGTCGTGCTC AATGCCCTGC GGCTGTCCAC AGCCATTGCA CCCTTGGAGA GCCTTTGA
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Protein sequence | MQTVSLSPLS LSPSSLPGAA VNSTPLAMLD DPHEWSAFSR SLAAQPSCWE SSVVFEGMHC AACALTIEDA LRRVPGVLSA DVSAASHRGR IVWSDQAIKP SGWMQAAARA GYPAVPANDA FANDRRRVET RQVLWRLGVA GMCMMQVMMY AWPAYVADPG DLAPDMAQLL RWASWVLSLP VLLFSCAPFF RNALRDLRHR RVSMDLPVAL GMGITFVVSS LGTFEPNGIF GAEVYFDSFT MFVFFLLTGR WLELRLRDRT AGALEALMNR LPDSVERRGA DGVFERVAVR RLSAGDVIRV LPGEAFPADG FILEGSTLAD ESLLTGESRP LPRGKGGIVI AGSHNLSAPV VVQVELTGSE TRFAQIVALM ESASTSKPKL AQLADRIAKP FLVFVLLAAG GAGAYWWSHD PGHALMVAVA VLIVTCPCAL SLATPAAMLA SAGALARNGV LVRRLQALEA MASVDAVVFD KTGTLTRDAF ALGEVHTREG VSKDNALAMA AALAQHSLHP VSRALVAAGQ GDALQHDAWV VQEAHETAGQ GVSGRLCIHG RPASAVMARL GSARFCDVAA PATPALHACL SDEQGWIATF ELQEDLRPDA HATVASLTAQ GVQVYLLSGD LPESAARVAR QAGINHARGG CTPQDKLAFL RGLQSQGHKV AMVGDGLNDG PVLAGAHVSF AFGQAVPLAQ AQSDLVVLGD RLGSVAQTLF QARRTFVIIR KNLWGSAIYN AVCVPLAVFG WLPAWLAGLG MALSSLLVVL NALRLSTAIA PLESL
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