Gene Pnap_3757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3757 
Symbol 
ID4689546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4006466 
End bp4007314 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content66% 
IMG OID639836775 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_983974 
Protein GI121606645 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.723748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.632538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAC AAACGTCCAC CGTCACCGGC TGCGGCAGCA GCACCTGCCA GTGCGCCGGC 
ACCACGGAGC AGGCGGCTGT GCCTGATGCT TTTATCAACG GCATCGCCTT GCATGCGCCC
GGACAGCGGC CCGGCGCCGA TGCGTTGCGC GAGCTGGCCT ATTCCGAACT GCTGCGCCAG
CATGCGGTGA TGAAAGGCCT GCTGCCGCGC CATAAAACCC TGAGCGCGCC CGAACTGGGC
GAAGCCGAGC GCCAGGTTAT CGAGGCCATG GTGGACGGCG AAGTGAGCAG CCCCCAGCCC
AACGAAGACG AATGCCAGCG CTATTACGAG GCCAATCCGT CGCAGTTCAT GGTCGGCCAG
GCGCTGCATG TGCGGCACAT TTTGTTTGCC GTCACGCCCG GCGTCAACGT GCATGCGCTG
ACCATCCATG CTGAAAAAGC CCTGCTGGAG CTGACCCGCA AGGACGCTTC GCCCGAGCGC
TTTGTCCAGC TGGCCGCCGA ACTCTCGAAC TGCCCGACCA GCGCCCAGGG TGGCGACCTG
GGCTGGGTCG GCCCGGACGA CTGCGCGCCC GAGCTGGCCA ACGAGCTGTT TCACCAGAAG
CACTCGCAAT GGGGCATGGG CGTGCATCCG CGCCTGATCC ACACGCGTTT CGGCTTTCAC
ATCATCGAGG TGCTCAACCG CCGCGCCGGC AAGACTCCCG CCTACGCCGA AGTGCGCGAG
CGCATCGCCA CGCTGCTGGC CGTGCAGTCG CGCGCCCGCG CGCTGCACCA GTACATGAGC
CTGCTGATCG GCGAAGCGCT GGTCGAGGGC ATCGCCCTCG AAGGGGCCGA TTCGCCGCTG
GTGCAATGA
 
Protein sequence
MNAQTSTVTG CGSSTCQCAG TTEQAAVPDA FINGIALHAP GQRPGADALR ELAYSELLRQ 
HAVMKGLLPR HKTLSAPELG EAERQVIEAM VDGEVSSPQP NEDECQRYYE ANPSQFMVGQ
ALHVRHILFA VTPGVNVHAL TIHAEKALLE LTRKDASPER FVQLAAELSN CPTSAQGGDL
GWVGPDDCAP ELANELFHQK HSQWGMGVHP RLIHTRFGFH IIEVLNRRAG KTPAYAEVRE
RIATLLAVQS RARALHQYMS LLIGEALVEG IALEGADSPL VQ