Gene Pnap_3698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3698 
Symbol 
ID4688135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3937189 
End bp3937824 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content71% 
IMG OID639836716 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_983915 
Protein GI121606586 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCT TCACCGCTCC GGCTTTCTTC GCTGGCCTGG CTTTAAGCCT GTCGCTCATC 
ATGGCCATCG GACCGCAAAA CGCCCATGTC ATGCGCATGG GCCTGCGGCG CGAGCACCTG
GGGCTGACGG TGGCGATCTG CGTGGTGACC GATGTGTCGC TGATCGCCGT CGGCGTGGGC
GGGCTGGCGC AACTGGGCGG CCTGTCGGGC AAGCTGCTGG GCGCGCTGAC GGGCGCCGGC
GCCGTCCTGC TGTTCATGTA CGGCGCGCAG GCGATGCAGC GCTTTGTCCG GCCGGCGCCG
CTGGCCGTAC CGGGCGCAGG GCAAGAGGCG GCGCCGGGCA TGTCGCGCCG CCGCGCCATC
GGCCTGGCCG TCGCCATGTC CTGGCTCAAT CCGCATGCCT GGCTGGACAC CGCCGTGCTG
ATGGGCACCG CCTCGCTGGC CTACGCGCGG CCCGACAACG CCGTGTTCGG TTTGGGCGCG
GCCGCCGGTT CGCTGCTGTG GTTCAGCGCC CTCGGCCTGG CGATGTGGAG CCTGGGCAGC
CGCCTGAACG CGCCGTGGGT CTGGCGCGCG CTCGACGGCC TGGTGGCGCT GATGATGTGG
GGCACCGCGC TGTGGTTGCT GGCCGGGTTG CTTTAG
 
Protein sequence
MNLFTAPAFF AGLALSLSLI MAIGPQNAHV MRMGLRREHL GLTVAICVVT DVSLIAVGVG 
GLAQLGGLSG KLLGALTGAG AVLLFMYGAQ AMQRFVRPAP LAVPGAGQEA APGMSRRRAI
GLAVAMSWLN PHAWLDTAVL MGTASLAYAR PDNAVFGLGA AAGSLLWFSA LGLAMWSLGS
RLNAPWVWRA LDGLVALMMW GTALWLLAGL L