Gene Pnap_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3584 
Symbol 
ID4686526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3807558 
End bp3808082 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content69% 
IMG OID639836597 
Productpeptidase M23B 
Protein accessionYP_983801 
Protein GI121606472 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTTGCC TTTCCGTGAC TTGCGGTGCG TTCGCGGCGC CAGCCGGTTC AGCGCCTGCG 
GCAGTTGCAG GTGCCCCGGC CGAACCGCCG GCCCTGCTGC TGCCGGTGCA AGGCATCGCG
CCCAGCGACC TGCGCGACAC TTTCGACGAC GGCCGCGACG GCAACCAGCG GGGCCACGAG
GCCATCGACA TCCTTGCGCC ACGCGGCACA CCGGTGCTGG CGGTGGACGA CGGGCGCATC
GTCAAGCTGT TCTTGAGCCA GCCCGGCGGC ATGACGGTTT ACCAGTTCGA CCCGACCGGC
CGGTTTGCCT ACTACTACGC GCACCTAGAC CGCTATGCCG ACGGCCTGGC CGAGGGGCAG
GCGGTGCGGC GCGGCAGCGT GATCGGCTAT GTCGGCTCGA CCGGCAACGC CAGCCCGGAC
GCGCCGCACC TGCATTTCGC CCTCTTCCGG CTGGGTCCGG AAAAACAGTG GTGGAAAGGC
GAGCCGGTCA ATCCGTTCAG GTACCTGGGC GGCAAGCCGC CTTGA
 
Protein sequence
MLCLSVTCGA FAAPAGSAPA AVAGAPAEPP ALLLPVQGIA PSDLRDTFDD GRDGNQRGHE 
AIDILAPRGT PVLAVDDGRI VKLFLSQPGG MTVYQFDPTG RFAYYYAHLD RYADGLAEGQ
AVRRGSVIGY VGSTGNASPD APHLHFALFR LGPEKQWWKG EPVNPFRYLG GKPP