| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3524 |
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| Symbol | |
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| ID | 4686346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3741055 |
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| End bp | 3744348 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836538 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_983742 |
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| Protein GI | 121606413 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC TGTCCGCCGA CTACAAGGCC CTTGCCAGCT ACCGCCCCAC GAACAAGGTG
CGTTTCGTCA CCGCCGCCAG CCTGTTCGAC GGGCACGACG CGGCCATCAA CATCATGCGG
CGCATCCTGC AGGGCATGGG CGCCGAGGTG GTGCACCTGG GCCACAACCG CAGCGTCGAT
GAGGTCGTGA CGGCCGCGCT GCAGGAAGAC GCGCAGGGCA TCGCCATCAG CTCCTACCAG
GGCGGGCATG TGGAGTATTT CAAGTACATG GTCGATCTGC TCAAGAGCCG GGGCGGCGAG
CACATCCAGG TGTTCGGCGG CGGCGGCGGC GTCATCGTCG GGCCGGAAAT CCGCGAACTG
CAGGCCTACG GCGTGGCGCG CATCTTCAGC CCCGAGGACG GCCAGCGCAT GGGCCTGGCC
GGCATGATCG GCGAGATGGT GATGCGCTGC GACCAGGACC TGTCCAGCTT TGCGCCCACC
GGCATCGAAG CCATCGAAGG CCACGGCGAG ATGAACTGGC GCTCGCTGGC CCAGCTCATC
ACCGCGCTCG AAGATGGCAA GGCCGATGAG GCGCTGGTGC AGGCGGTGCG GGAACAGGCT
GCTACGAAAA AGATACCGGT GCTGGGCATT ACCGGCACCG GCGGCGCGGG CAAGTCGTCG
CTGACCGACG AGCTGATCCG CCGCCTGCGG CTGGACCAGG GCGACCAGCT GCGCGTGGCG
CTGATCAGTA TCGACCCGTC GCGCCGCAAG AGCGGCGGCG CGCTGCTGGG CGACCGCATC
CGCATGAACG CCATCAACCC GTGGAGCCAG GGCCAGCGCG TGTTCATGCG CTCCCTGGCC
ACGCGCGACT TCGGCAGCGA AATCAGCAAG GCGCTGCCCG ACGTGATTGC CGCCTGCAAG
GCCGCCGGCT TTGATTTGAT CATCGTCGAA ACCTCTGGCA TCGGCCAGGG CGACGCCGCC
ATCGTGCCGC ATGTCGATGT GCCGATGTAC GTCATGACAC CCGAGTTCGG CGCGGCCAGC
CAGCTGGAAA AAATCGACAT GCTGGACTTT GCCGAGTTCG TCGCCATCAA CAAGTTCGAC
CGCAAGGGCG CGCTCGATGC CCTGCGCGAC GTGGCCAAGC AGGTGCAGCG CAACAAGGAA
GCCTGGACCA CGCCCGCCGA CCAGATGCCG GTGTTCGGCA CCATGGCCGC GCGCTTCAAC
GATGACGGCG TGACCGCGCT CTACCAGGCG CTCAAGCCCC GCCTGGGCGC GCTGGGCCTG
AGCTTGACCG ACGGCACGCT GCCGCTGGTG GCGGTTCGCC ACAGCACCAA CCAGACGCCG
GTCGTGCCGG CCGCCCGCAC CCGCTACCTG GCCGAGATCA CCGACACCGT GCGCGGCTAC
AAGCAGCGCG GGCAGGCGCA GGCCCGGCTG GCCAGGGAAA TCCAGCAGCT GCGCGCCACG
TCAAGCATGC TGACGGCAAG CAAGTCCGAC ACCTCTAATG CCGTTGACGC GGTAGTCAAG
CTGGCCGTCG AGCGCGAACA GACGCAGGAT CCGTCGGCCA AAAAACTGCT GGCCCAGTGG
CCCGAGATGC AAAAAGCCTA TGCCGGCGAC GAGTACGTCG TGAAAATCCG CGACAAGGAA
ATCCGCACCG CGCTGACCAG CAAATCCCTC TCCGGGACCA CCATCCGCAA GGTCTGCCTG
CCCCAATACG AAGACCACGG CGAAATCCTC AAGTGGCTGG TGCTGGACAA CGTGCCGGGC
AGCTACCCCT ACACCGCCGG CACCTTCGCC TTCAAGCGCG AGGGCGAAGA CCCGACCCGC
ATGTTCGCCG GCGAGGGCGA CCCGTTTCGC ACCAACACGC GCTTCAAGCT GCTGAGTTCG
GGCATGGCCG CCAAGCGCCT GTCCACCGCC TTCGACTCGG TCACGCTCTA CGGCAACGAC
CCGGACCCGC GCCCCGACAT CTACGGCAAG GTCGGCAACT CGGGCGTGTC GATTGCCACG
CTGGACGACA TGAAGGTGCT GTACGGCGGC TTCGATCTGT GCAGCCCCAG CACTTCCGTG
TCGATGACCA TCAACGGCCC GGCGCCGAGC ATCCTGGCGA TGTTCATGAA CACAGCCATC
GACCAGAACC TGGAAAAGTT CAAGGCCGAG AACGGCCGGG AACCCACCGA CACCGAAATC
GCCAAGATCC GCGAATGGGT GCAGGCCAAC GTGCGCGGCA CGGTGCAGGC CGACATCCTG
AAGGAAGACC AGGGCCAGAA CACCTGCATT TTCTCGACCG AGTTCAGCCT GAAGGTGATG
GGCGACATCG CCGAATACTT CGTGCACCAC AACGTGCGCA ACTTCTACAG CGTGTCGATC
AGCGGCTACC ACATCGCCGA AGCCGGCGCG AACCCGATCA GCCAGTTGGC CTTCACGCTG
TCCAACGGCT TCACGTTCGT CGAAGCGTAT CTGGCGCGCG GCATGCACAT CGACGACTTC
GCGCCGAACC TGAGTTTCTT CTTCAGCAAC GGCATGGACC CCGAGTACAC CGTGATGGGC
CGCGTGGCGC GCCGCATCTG GGCGGTGGCG ATGAAGGAAA AATACGGCGC CAACGAACGC
AGCCAAAAGC TCAAGTACCA CATCCAGACC TCGGGCCGCA GCCTGCACGC GCAGGAGATC
CAGTTCAACG ACATCCGCAC GACGCTGCAA GCCTTGATCG CGATCTACGA CAACTGCAAT
TCGCTGCACA CCAACGCCTT CGACGAAGCC ATCACGACAC CGACCGAGGA CAGCGTGCGC
CGCGCCATGG CGATCCAGCT GATCATCAAC CGCGAATGGG GACTGGCCAA GAACGAAAAC
CCAAGCCAGG GCGCGTTCAT CATCGAGGAA TTGACCGAAC TGGTCGAGGA AGCCGTGCTG
ACCGAGTTCC AGAACATCGC TGACCGGGGC GGCGTGCTCG GCGCGATGGA AACGGGCTAC
CAGCGCGGCC GCATCCAGGA CGAGTCGATG CACTACGAGA TGCTCAAGCA CACCGGCGAG
CTACCGATCA TCGGCGTCAA CACCTTCCGC AACCCGCACG GCGACGCGGT GCATGACAAG
CTGGAACTGG CGCGCTCGAC CGACGAGGAA AAGCAGAGCC AGCTCAGGCG CCTGGCGGAT
TTCCACACCC GCCACGCAGC CCAGGCGCCA GCGCAGCTCA AGCGCCTGCA GCAGGCGGTG
ATCGAGAACA AGAACGTCTT CGAGGTGCTG ATGGACGCGG TGCGCGTGTG CTCGCTCGGG
CAGGTCACCA ATGCGCTGTT CGAGGTCGGC GGACAGTACC GGCGCAATAT GTAA
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| Protein sequence | MTDLSADYKA LASYRPTNKV RFVTAASLFD GHDAAINIMR RILQGMGAEV VHLGHNRSVD
EVVTAALQED AQGIAISSYQ GGHVEYFKYM VDLLKSRGGE HIQVFGGGGG VIVGPEIREL
QAYGVARIFS PEDGQRMGLA GMIGEMVMRC DQDLSSFAPT GIEAIEGHGE MNWRSLAQLI
TALEDGKADE ALVQAVREQA ATKKIPVLGI TGTGGAGKSS LTDELIRRLR LDQGDQLRVA
LISIDPSRRK SGGALLGDRI RMNAINPWSQ GQRVFMRSLA TRDFGSEISK ALPDVIAACK
AAGFDLIIVE TSGIGQGDAA IVPHVDVPMY VMTPEFGAAS QLEKIDMLDF AEFVAINKFD
RKGALDALRD VAKQVQRNKE AWTTPADQMP VFGTMAARFN DDGVTALYQA LKPRLGALGL
SLTDGTLPLV AVRHSTNQTP VVPAARTRYL AEITDTVRGY KQRGQAQARL AREIQQLRAT
SSMLTASKSD TSNAVDAVVK LAVEREQTQD PSAKKLLAQW PEMQKAYAGD EYVVKIRDKE
IRTALTSKSL SGTTIRKVCL PQYEDHGEIL KWLVLDNVPG SYPYTAGTFA FKREGEDPTR
MFAGEGDPFR TNTRFKLLSS GMAAKRLSTA FDSVTLYGND PDPRPDIYGK VGNSGVSIAT
LDDMKVLYGG FDLCSPSTSV SMTINGPAPS ILAMFMNTAI DQNLEKFKAE NGREPTDTEI
AKIREWVQAN VRGTVQADIL KEDQGQNTCI FSTEFSLKVM GDIAEYFVHH NVRNFYSVSI
SGYHIAEAGA NPISQLAFTL SNGFTFVEAY LARGMHIDDF APNLSFFFSN GMDPEYTVMG
RVARRIWAVA MKEKYGANER SQKLKYHIQT SGRSLHAQEI QFNDIRTTLQ ALIAIYDNCN
SLHTNAFDEA ITTPTEDSVR RAMAIQLIIN REWGLAKNEN PSQGAFIIEE LTELVEEAVL
TEFQNIADRG GVLGAMETGY QRGRIQDESM HYEMLKHTGE LPIIGVNTFR NPHGDAVHDK
LELARSTDEE KQSQLRRLAD FHTRHAAQAP AQLKRLQQAV IENKNVFEVL MDAVRVCSLG
QVTNALFEVG GQYRRNM
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