| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3515 |
|---|
| Symbol | |
|---|
| ID | 4689172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3730601 |
|---|
| End bp | 3731848 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639836529 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_983733 |
|---|
| Protein GI | 121606404 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTAC TCGACCACAA CCCCAGCCTC GAACCCCGGA TTCACCGCAA CCCACCTCTG
CTGCCGCGCC TGCGCGAGCG GTTTGAGCAG AAATTCATGG CCCACTGGCA AAGCCAGTGG
GGTGGCAAAC CCATCCTGCA CGGGCGCAAT CCCGGATCAG AGTCGATCCG GCTCGACGGC
AATGATTACC TGGGCCTGTC GGGCAATCCG GACATCGTCC GGGCGCAGAT GGCCAGCTTG
CAGCACAGCA ATGAAAGCGT GATCCAGTCG GGTGTTTTTC TGCTTGATGC GCACCCGTGC
CGGACGCTGG AAGCCTCCCT GGCGGCCTGG GTGGGCAAGG AAGACGGCTT TGTCTGCCAG
TCGGGCTACT CGGCCAATGT CGGGCTGCTG CAGGCGATTG CCGACGAACA GACCCCTGTC
TATCTTGACA GCCTGGCCCA CACCTCTTTA TGGGAAGGCG TGCGTGCGGC GCGTGCGCCG
GCGTATGCAT TTCGCCACAA CGACCCCGCG CACCTCTCGC GCATGATTGC CCGCCACGGA
CCCGGCGTGG TGGTGGTGGA TTCGGTGTAC AGCACCACGG GCGCCCTGTG CCCGCTGCGG
GAGATGGTCG AGGTGGTCGA GCAGCATGGC TGCACCATCC TGGTCGATGA GTCGCATTCG
CTGGGCACCC ATGGCCCGCA GGGCGCGGGG CTGTGCGCTG AACTGGGCCT GACGGACCGG
GTGCACTTCA TCACCGCCAG CCTGGCCAAG GCGTTTGCTG GCCGGGCCGG GTTTTTCACC
ATTCCGGCCG AGTTGCGCTA CTACGTGCTG CACAACAGCT ACCCGAACAT TTTCAGCTCC
TGCCTGCTGC CGCACGAAAT CGCCGGCCTG GCGGCCACGC TGGAGGTGGT CAAGCGCAGC
GACGCCGAGC GGGTGCGGCT GCATGCCAAC ACGCGCCGGC TGCGCGCCAG CCTGTCGGAG
ATAGGCTACC CCATCCATCA GGGCAGCCAG CAGATCATTG CGCTGGAAAC CGGCACCGAG
CCGGCCACCA TGGTGCTGCG CGACCATCTG GAAGAGCGCC AGATTTTCGG CGCCATTTTT
TGCGCGCCCG CCACCAGCCG TAACCGGGCC ATGGTGCGGC TGACGCTCAA TGCCGGGCTG
ACCGGCTCCG AGATGGACCG GATCGAGCAG ACCGCGAAAG AGCTTGCGCC TGTCCTCAAG
CCCTGGGACT GGCCGATTGC CAAACGCGCC CGCACCGAGC AGGTCTGA
|
|---|
| Protein sequence | MQVLDHNPSL EPRIHRNPPL LPRLRERFEQ KFMAHWQSQW GGKPILHGRN PGSESIRLDG
NDYLGLSGNP DIVRAQMASL QHSNESVIQS GVFLLDAHPC RTLEASLAAW VGKEDGFVCQ
SGYSANVGLL QAIADEQTPV YLDSLAHTSL WEGVRAARAP AYAFRHNDPA HLSRMIARHG
PGVVVVDSVY STTGALCPLR EMVEVVEQHG CTILVDESHS LGTHGPQGAG LCAELGLTDR
VHFITASLAK AFAGRAGFFT IPAELRYYVL HNSYPNIFSS CLLPHEIAGL AATLEVVKRS
DAERVRLHAN TRRLRASLSE IGYPIHQGSQ QIIALETGTE PATMVLRDHL EERQIFGAIF
CAPATSRNRA MVRLTLNAGL TGSEMDRIEQ TAKELAPVLK PWDWPIAKRA RTEQV
|
|---|
| |