| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3512 |
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| Symbol | |
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| ID | 4687879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3727528 |
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| End bp | 3728196 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836526 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_983730 |
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| Protein GI | 121606401 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.492486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTAC CTGCTAACTT TGACAGCGTC TGCCTGGACG GCATCATGAG CGACTGGCTG
TCCGCCCTGG GCGAATTCTC GGTCGAAGCC CTGGTGGTCC TGGGGCCCGA TCCTTTTGCC
GGCCAGGAAA GCCGGCTGGT GCTGGCCCTG CATCCTCCAC GGCTGCTGGA AGCGGCGCAA
GCCCTGGCCG CCAGCCAAGA CTTCGGCGCG CCCTGGCGGG ATTCCGATGC GCCGCTGGTG
GCCTGGCAGG ATATTTCCAG AGCGGCTTTC GGTGATCTGG GCCGCTGGCG CAGGCTGTGG
CTGGCGCATG GCTTTCAAAG CGTCGTGCGG ATTGCCTTTC CGCTGACCGT GGGCCGCGCT
TTTGAATGCT ATCTGTTCAG CGCGCGCCAG TGGCCTGACC GCACCGAGCC GTCGCAGCTG
GCCTGGTCGG CGCTCAATAT CTGGCCTTTG GTGAAGCGGG CGCTGGCCCA GGCCAGAAAC
CCGCTGAGCC CGCGCGAACT CGAATGCCTG GACCTGGCGT TTCAGGGCAT GACGGCGCGC
AAAACCGGCG ACATGCTGGC GTGCAGCGAG CGCACCGTCA ACTTTCACCT GGCCAATGCC
ATGAACAAGC TCAAGGTGGA CAACAAAATG GCCGCCGTCC AGCGCGCCTG CTGGTTTGGC
CTGATTTGA
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| Protein sequence | MQLPANFDSV CLDGIMSDWL SALGEFSVEA LVVLGPDPFA GQESRLVLAL HPPRLLEAAQ
ALAASQDFGA PWRDSDAPLV AWQDISRAAF GDLGRWRRLW LAHGFQSVVR IAFPLTVGRA
FECYLFSARQ WPDRTEPSQL AWSALNIWPL VKRALAQARN PLSPRELECL DLAFQGMTAR
KTGDMLACSE RTVNFHLANA MNKLKVDNKM AAVQRACWFG LI
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