Gene Pnap_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3464 
Symbol 
ID4687157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3674875 
End bp3675405 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content67% 
IMG OID639836478 
ProductMgtC/SapB transporter 
Protein accessionYP_983682 
Protein GI121606353 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.158085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAA GCGCGTGGCA GCAAGTTGGC CAAACCATCG TCGCCGAGTT TTCAGACCTG 
CCCGACGCCG CGCAGGTCAC GCGAATTTTG CTGCGCCTGA CGCTGGCCGC GCTGCTGGGC
GGCTTGCTGG GCATCGAGCG CGAGCAAAAA GGCAAGGCCG CCGGCGTGCG CACGCACATG
CTGGTGGCCA TGGGCGCGGC GCTGTTCGTG CTGCTGTCGC AGCAGGCCGG CATGCCGCCG
TCCGACCTGA GCCGGGTCAT CCAGGGCGTC ATTGCCGGCA TCGGTTTTCT GGGCGCGGGC
ACCATCCTCA AGGGCGACGA CCTGGGAAAA GTCAAGGGGC TGACCACGGC GGCCGGCATC
TGGCTGACCG CCGCCATCGG CGTGGCCGCC GGCATGGGAC GCGAATCGAC GGCGGTGCTC
AGCACCTTGC TGGCGCTGGC CATTTTTACC CTGATGCCGC GCGTGATCAG GCTGGTGGAA
AAACCGGAAT CGCGGGTGGT CGATGCCAGC TCGGCCCGGG AAAAGCCATG A
 
Protein sequence
MASSAWQQVG QTIVAEFSDL PDAAQVTRIL LRLTLAALLG GLLGIEREQK GKAAGVRTHM 
LVAMGAALFV LLSQQAGMPP SDLSRVIQGV IAGIGFLGAG TILKGDDLGK VKGLTTAAGI
WLTAAIGVAA GMGRESTAVL STLLALAIFT LMPRVIRLVE KPESRVVDAS SAREKP