| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3453 |
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| Symbol | |
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| ID | 4687716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3663407 |
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| End bp | 3664705 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836467 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_983671 |
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| Protein GI | 121606342 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCA CGCTGTTGTT CGTGGCGTTC ATCGCCATGA TGCTGGTGGG CGTTCCCATC
GGCGCGGCGC TTGGCCTGGC CGGCGCCACG GCGATTGCGC TGGCCAATGG CGATTCACAG
TGGTTCGGCC TGCTGGCCGT GCCGCAGAAT TTTTATGCCG GTCTGGGCAA ATACCCGCTG
CTGGCGATTC CGATGTTCGT GCTGGTCGGC TCGATCTTTG ACCGTTCCGG CGTCGCCCTG
CGACTGGTCA ACTTTGCCGT CGCCATCGTC GGGCGCGGCC CCGGCATGCT GCCGCTGGTG
GCGATTGCGG TGGCGATGTT TTTGGGCGGC ATCTCGGGCT CCGGCCCGGC CTGCGCGGCG
GCGGTCGGCG GCGTGATGAT CGCGGCCATG AACCGCGCCG GCTACCCGGC GGCATTCTCG
GCCAGCGTGG TGGGCGCTGC GGCGGCCACC GACATCCTGA TTCCGCCGTC GGTGGCCTTC
ATCATTTACT CGGTGCTGGT GCCGGGCGCT TCGGTGCCGG CGCTGTTTGC GGCCGGCATG
GTTCCGGGCA TCCTGGCCGG GCTGGCGCTG ATCGTTCCGG CGGTCTGGCT GTCGCGCAGG
CACAAGATGG GCGCGCTGGA AGCGAGCATG CCGCGCCCGC CGTTCTGGGC GAGTTTTCGC
GAGGCGGTCT GGGGCCTGGC CGCGCCGGTG CTGATTCTGG GCGGCATGCG CGCCGGCTGG
TTCACGCCGA CCGAAGCGGC GGTGGTGGCG GTGTTTTACG GCCTGTTCAT CGGCATGGCG
GTTTACCGCA CGATCTCGGT TCGCGACCTG TTTCCGATCC TGCGCGAGTC GGGCGAGTTG
TCGGCGGTGA TCTTGCTGGT GGTGTCGCTG GCGGGCATTT TTGCCTATTC GCTGAACACG
CTGGGCGTGA TCGACCCGCT GACCCGTGTC ATCGTCAACT CCGGGCTGGG CGAGTACGGT
ATCTTGTCGC TCTTGATTTT GATGCTGATC ACGGTGGGCA TGTTCCTGGA CGGGATTTCG
ATCTTCCTGA TCTTTGTGCC GCTGCTGCTG CCGATTGCCC AGTTTTACCA CTGGGACCTG
GTGTGGTTCG GCGTCATCCT GACGCTCAAG GTGGCGCTCG GGCAGTTCAC GCCGCCGCTG
GCCGTGAACC TGATGGTGTC CTGCCGGATT GCCAATGTGC GCATGGAAGA AACCGTGCGC
TGGGTGGTCT GGATGCTGGC CGCGATGTTC ATGGTGCTGG TCGCCGTGAT CGCCTTCCCC
GAACTGGCGC TGTGGCTGCC GCGCAAGCTG GGCTACTGA
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| Protein sequence | MIATLLFVAF IAMMLVGVPI GAALGLAGAT AIALANGDSQ WFGLLAVPQN FYAGLGKYPL
LAIPMFVLVG SIFDRSGVAL RLVNFAVAIV GRGPGMLPLV AIAVAMFLGG ISGSGPACAA
AVGGVMIAAM NRAGYPAAFS ASVVGAAAAT DILIPPSVAF IIYSVLVPGA SVPALFAAGM
VPGILAGLAL IVPAVWLSRR HKMGALEASM PRPPFWASFR EAVWGLAAPV LILGGMRAGW
FTPTEAAVVA VFYGLFIGMA VYRTISVRDL FPILRESGEL SAVILLVVSL AGIFAYSLNT
LGVIDPLTRV IVNSGLGEYG ILSLLILMLI TVGMFLDGIS IFLIFVPLLL PIAQFYHWDL
VWFGVILTLK VALGQFTPPL AVNLMVSCRI ANVRMEETVR WVVWMLAAMF MVLVAVIAFP
ELALWLPRKL GY
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