| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3407 |
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| Symbol | aroE |
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| ID | 4686945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3613839 |
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| End bp | 3614699 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639836421 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_983625 |
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| Protein GI | 121606296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.21779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG ATAACGCGGC AATCGACCGC TATTTTGTGC TCGGCAACCC GATTGCCCAC
AGCCGATCCC CGCAGATCCA TGCGCGTTTT GCCGAGCTGG CCGGGCAGGC CATCGACTAC
CAGCGCTGCC TGGTGCCGCT GGACGGGTTT GCGGCCACGC TGGCGCAACT GGTCCAGGAC
GGCGTGCGCG GCTGCAATGT CACCGTGCCG TTCAAGTTCG AGGCGTTTCA AGCCGCAAAC
ACCCGCAGCG ACCGGGCGCA GTTGGCCCAG GCCGTCAACA CGCTGGTGAT GGAAAACAGC
AAGATTCATG CGGACAACAC CGATGGCGTC GGGCTGGTCA ATGACATCCA GGTCAACGCG
GGCGTGCCGC TGGCCGGGCG CGACGTGCTC TTGATTGGCG CGGGCGGCGC GGGCGCGGGC
GTGCTGGGGC CGCTGCTGGC GGCCGGGCCG CGCCGGCTGG TGCTGGTCAA CCGCACACTG
GCCAAGGCCG AGGCGCTGGC GGCGCGTCAC AGGGCGCATG CCTCGCTGCA GACAGTGCTA
CAAAAAACAG AGCTACTGGT GCAGGAGCCG CATGCGGTAG AGGGTGAGTT CGATGTGATT
GTCAATGCCA GCGCCAGCAG CCTTGCAGGC AGCGCCGTGC CGGTGGCCGG CAGCGTGCTC
AAGCCCGGCG CGCTGGCTTA CGACATGATG TACGGCCCAG CGGCGGCCGG CTTCATGGCC
TGGGCGCGCG AGCATGGCGC CAGCCCGCGC GACGGCCTGG GCATGCTGGT CGAGCAGGCT
GCCGAATCGT TTTCATTGTG GCGCGGCGTG CGTCCGCCAG CGGCGCAGGT GCTGCAGGAA
CTGCGCTTGC TGCTGGCATG A
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| Protein sequence | MTSDNAAIDR YFVLGNPIAH SRSPQIHARF AELAGQAIDY QRCLVPLDGF AATLAQLVQD
GVRGCNVTVP FKFEAFQAAN TRSDRAQLAQ AVNTLVMENS KIHADNTDGV GLVNDIQVNA
GVPLAGRDVL LIGAGGAGAG VLGPLLAAGP RRLVLVNRTL AKAEALAARH RAHASLQTVL
QKTELLVQEP HAVEGEFDVI VNASASSLAG SAVPVAGSVL KPGALAYDMM YGPAAAGFMA
WAREHGASPR DGLGMLVEQA AESFSLWRGV RPPAAQVLQE LRLLLA
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