| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3395 |
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| Symbol | |
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| ID | 4687713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3600126 |
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| End bp | 3601553 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836409 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_983613 |
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| Protein GI | 121606284 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.740162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.71515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATAC ATATTCTGGG AATCTGCGGG ACTTTCATGG GCGGCCTGGC CGCGCTGGCA
CGGGAGGCGG GGCACAAGGT GACGGGTTGC GACACCGGCG TCTATCCGCC GATGAGCGAC
CAGTTGCGCG GCCTGGGCAT TGAGCTGATT GAAGGCTACA GCGCCGACCA GATGGCCCTG
GCGCCCGATG TGTTCGTGAT TGGCAATGTG GTCTCTCGCG CGCGGCTGGC CGACGGCACA
CCCAAATATC CGTTGATGGA AGCCATCCTC AACAGCGGCC AGCCCTACAC CAGCGGGCCG
CAGTGGCTGT CGGGCCATGT GCTGCACCAC CCGACGCACC ATGCCACCGG CCCGCGCCAT
GTGCTGGCCG TCGCCGGCAC CCACGGCAAG ACCACCACGA CCGCCATGCT GACCTGGATC
CTGGAATGCG CCGGCCTGCA GCCCGGTTTT CTGATCGGCG GCGTGCCGCT GAACTTTGGC
GTGTCGGCGC GCCTGGGGAC GGGAAACGCC TTTGTCATCG AAGCCGATGA ATACGACACG
GCGTTTTTCG ACAAGCGCAG CAAGTTTGTC CACTACCGCC CGCGCACAGC GATCTTGAAC
AACCTGGAAT TCGACCACGC CGATATTTTT GACGACCTGG CAGCCATCGA ACGGCAGTTC
CATCACCTGG TGCGCACCGT TCCCTCACAG GGCCGGGTGG TTTTCAATGC CAACGAGGAC
AGCTTGCAGC GCGTGCTGGC CCAGGGCTGC TGGAGCGAAC AGGTGCCGTT TGGCGGCGCC
CCCGGTCATG GCGGTTTTAC AGCGCAGGGC GAGCCGAACG ATTTCCAGGT GCTCAAGGCC
GGCGAAACCG TTGCCCGGCT GCAGTGGGAC ATCAGCGGCA TGCACAACCA GCTCAACGCG
CTGGCGGCCA TCGCCGCCGC CGAGCATCTG GGCGTGGCAC CCGAAGCGGC TGCCGAGGCG
CTGGCCTCAT TCCAGAACGT CAAGCGCCGC ATGGAAGTGC GCGGCAGCGT GCAGCGCGCT
GGCGGCCCCA TCACGGTGTA TGACGATTTC GCCCACCATC CAACCGCCAT TCACACCACT
ATCGACGGCC TGCGCCGTCA GCTTGATGGC GCGGGCAAAA GCGCCGAACG CATCCTGGCG
ATTTTCGAGC CGCGCAGCAA CACCATGAAG CTCGGCACCA TGACCGCGCA ACTGCCGTGG
AGCCTGGAGC ACGCCGACCT GGCGTTTTGC CATGCCGGCG GACTGGACTG GGACGCCCGC
GCCGCGCTGG CCCCAATGGC GGAACGCGCC CAGGTGGCCG ACGATCTGGA CCAGTTGCTG
GCGCAGGTCA AGGCCGCCGC CCGGCCGGGC GACCATTTGC TGTGCATGAG CAACGGCGGC
TTTGGCGGCA TTCATGCCAA ATTGCTGGCG GCGCTGACGC AGCCATGA
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| Protein sequence | MHIHILGICG TFMGGLAALA REAGHKVTGC DTGVYPPMSD QLRGLGIELI EGYSADQMAL
APDVFVIGNV VSRARLADGT PKYPLMEAIL NSGQPYTSGP QWLSGHVLHH PTHHATGPRH
VLAVAGTHGK TTTTAMLTWI LECAGLQPGF LIGGVPLNFG VSARLGTGNA FVIEADEYDT
AFFDKRSKFV HYRPRTAILN NLEFDHADIF DDLAAIERQF HHLVRTVPSQ GRVVFNANED
SLQRVLAQGC WSEQVPFGGA PGHGGFTAQG EPNDFQVLKA GETVARLQWD ISGMHNQLNA
LAAIAAAEHL GVAPEAAAEA LASFQNVKRR MEVRGSVQRA GGPITVYDDF AHHPTAIHTT
IDGLRRQLDG AGKSAERILA IFEPRSNTMK LGTMTAQLPW SLEHADLAFC HAGGLDWDAR
AALAPMAERA QVADDLDQLL AQVKAAARPG DHLLCMSNGG FGGIHAKLLA ALTQP
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