Gene Pnap_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3290 
Symbol 
ID4688564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3497851 
End bp3498771 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content62% 
IMG OID639836303 
Productphage capsid scaffolding 
Protein accessionYP_983509 
Protein GI121606180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.963885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCT TGATTGAAGC TATCGCGCGG GCAAGCGACG ATGCAGCCAT CCTCAACAGC 
TGCATCAACA TGTCCACCAC CAAATCCAAG TTTTTCCGCG TCGCCGTCGA AGGCGCCACT
ACCGACGGCC GCGTCATCGA GCGCGCTTGG CTTGAACAGA TGTCGAAGAA TTTCGACCCG
GCCAAGTACG GCGCCCGGAT CTGGATGGAG CACATGCGCG GCATGTATCC GGACAGCGCC
TTCCGGGCCT ACGGCGATGT CACGGCTTTG AAGACCGAGG AATTCAGCAT CGACGGCCAG
AAGCGGCTGG CCCTGATGGC CGAGATCAAG CCGCTGCCCG AGCTCGTGGC CATGAGCAAG
GCCGGCCAGA AGATCTACAC CAGCATCGAG ATCAATCCCA AGTTCGGCAG CAGCGGCGAA
GCCTATCTGG TGGGCCTGGG CGTGACCGAC AGCCCGGCCA GCCTGGGCAC CGAGGTGCTG
GAGTTCGCCG CCAAGAACCC GGCGGCCAAC CCCTTCACGA AACGCAAGCA AGCCGCTGAC
AACATGTTTT CAGCAGCGGT CGAAGTCACG CTGGAATTTG AGACGACGGA AGAAGACACC
CGCAAGTTTT CCGCCGCCCT CAAAGGCATC AAGGACACCC TGGCCAAGTT CAGCGGGAAG
TCGCAGCGCA GCGACGACAC CACGGGCCAG ATCCTCGAAG TCGTCACCGA CATGGCCGAC
GGCATGGGCC AGCTCAATGA GCAGCACAGC GCCCATGCCA AAAGCCTGGC TGCGCTGGAA
AAGAACTTTG CCACGCAGCA GACCGAGCAC AAGACCCTGC AGGACAAGTT TGCGCTGATC
GACACGACAG ACGCCGGCAA GCACAGCCAG CGCCCGCCGG CCACCGGCAA CAACGGCAAA
TCCGCCCTCA CCGACTGCTG A
 
Protein sequence
MTALIEAIAR ASDDAAILNS CINMSTTKSK FFRVAVEGAT TDGRVIERAW LEQMSKNFDP 
AKYGARIWME HMRGMYPDSA FRAYGDVTAL KTEEFSIDGQ KRLALMAEIK PLPELVAMSK
AGQKIYTSIE INPKFGSSGE AYLVGLGVTD SPASLGTEVL EFAAKNPAAN PFTKRKQAAD
NMFSAAVEVT LEFETTEEDT RKFSAALKGI KDTLAKFSGK SQRSDDTTGQ ILEVVTDMAD
GMGQLNEQHS AHAKSLAALE KNFATQQTEH KTLQDKFALI DTTDAGKHSQ RPPATGNNGK
SALTDC