| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3281 |
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| Symbol | |
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| ID | 4688201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3483311 |
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| End bp | 3485353 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836294 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_983500 |
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| Protein GI | 121606171 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCAC ACCTTTCCCC CGATTCCCAG CAAATCCACT ACCGGCACGA GTTGCTTCAG
GCCGGGCTGG ACCTGCTCGA CCAGGGCTTG ACGGTGATTG ATGCCAATCT GAACTTCGTG
GCCTGGAACA AGGCCTTTTT GCGCCTGCTG GACTTCCCAG AAAGCATGGC TTTTGTCGGC
GCCACTTTCG AGTCCTTCAT GCGCTACAAC GCCGAACGCG GCGAATACGG GCCGGGCGAC
GTGGAAGAAC TGGTGGCCGA GCGCATGCGC CTGGCGCGTC ATTTCACGCC GCACTACACC
GAGCGCGACC GGCCGGACGG GCAGATTCTG GCGGTGCGCG GCGAGCCCTT GCCGCACAAC
GGTTTTGTCA CGCTGTACAC CGACATCACC GCCAGCCGCC GCTACGAGCA GCAGATCCAG
CAGCAGAACA CCGAGCTGGA GCAGCGGGTG GCCGAGCGCA CCCATGAACT GCAGGCCACC
AACCGGCGCC TGATCGTGGC CGACGACGCC AACCAGCGCA TCACCGAGGC ATTGCGGCGC
AGCGAGGAAA ACCTGCGCCT GATCACCGAC ACCGTGCCCG CGCTGATTGG CTACTTTGAC
CGCCAGGAGA TCTACCGCTA CGTCAACAAA GGCTACGCCG ACTGGTTTGG CGCCGCCAAG
GAGGGCATGC TGGGCCACTC CATTCGCGAC GTGGTCGGCG ACGAGGTCTA TACCGATATT
TCAAAGCATG TGCATCTGGC GCTGAAGGGC CAGCGCGTCA GCTACGAGTA CGCCATGCGC
CGCCCCGGCG GACGGGTGGT GTATGCGCGC AGCGAACTCG TGCCCGAGTT GGACGCCAAG
GGCCGCGTGG CCGGGTGTTT TGTGCTGTCC GTCAACATCA CCGACCTCAA GAACGCCCAG
GCAGCGCTGG TGCACGCGCA AAAAATGGAG GCGGTCGGGC AACTGACCGG CGGGCTGGCG
CACGATTTCA ACAACCTGCT GACGGTCGTG ATCGGCAACC TGGTCAGCCT GCATGAGCGC
TACCCCGACG ACCCGGACAT TGGCGAGTAT GTAGCGCCTG CGCTGAAAGC CTCGCGCCGG
GGTGCGTCCC TGATCAAGCG GCTGCTGGCA TTTGCCCGCA AGCAGCCGCT GTCGCTGCGC
TCCGTGAACA TCGCCGAGCT GGTCAGCGAA AGCATGATCC TGCTCAAGCG CACCTTGCCG
GCGAACATCA CCGTGACCGC CACGCCGATG AGCGAGGCCG TGCATGCCAT CACCGACGTG
CAGCAGCTTG AAAACGCCTT GCTCAACCTC GCGCTGAACG CGCGTGACGC CATGCCGGAG
GGGGGGCAGT TGACCATCGG GGCAAGCTGC GTGGAGCTGG GCCAGGCGCA GGCGGCGGAT
TTTGACGTGG CCCCCGGTTG CTACGTGGCC CTGAGCGTGT CCGACACCGG CACCGGCATG
GACGCCGCCA CGCAGGCGCG CGCCTCCGAG CCTTTTTTCA CCACCAAGCG CTTTGGCTCG
GGAAGCGGCC TGGGCCTGTC GATGGTGTAT GGCTTTGCCA AGCAGTCCGG TGGCGGCATC
CGCATTCAGA GTGCCTTGGG CGAGGGTTGC GTGGTCACGC TGGTGTTGCC CTGCGTGGAC
AACGAGCTTG AGGACGAGCC GCCGCCGGAC CTGCACCACC GCCTAGCCCG GCAGGGCGCG
CAGCGCCCGC TGGTGCTGCT GGTGGAAGAC GACCCCGACG TGCGCCGGGT GATCCGGCTG
CAACTGGTTG GCCTGGGTTA TCCGGTGATC GAAGCGGACC ATGCGGCCGA TGCCTTGCTG
CTGCTGACCA GCGTGCCCAC CGTGGGCATC CTGGTTTCTG ACGTGGTGAT GCCCGGCGGC
ATGGACGGAC GGGCCTTGTG CGTGGCGGCC AGCCAGCGTG CGCCGCATGT GAAGGCGTTG
CTGATCAGCG GCTATTCCGA CGGCGAAGCG GCCTCGGCCA GGGAGGCTGC CGGGTTTGCG
CTGCTGAAAA AACCGTTCAC CGCCGCCGAG TTGCAGCATG CGCTCGATGG CTTGACGGCA
TGA
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| Protein sequence | MSSHLSPDSQ QIHYRHELLQ AGLDLLDQGL TVIDANLNFV AWNKAFLRLL DFPESMAFVG
ATFESFMRYN AERGEYGPGD VEELVAERMR LARHFTPHYT ERDRPDGQIL AVRGEPLPHN
GFVTLYTDIT ASRRYEQQIQ QQNTELEQRV AERTHELQAT NRRLIVADDA NQRITEALRR
SEENLRLITD TVPALIGYFD RQEIYRYVNK GYADWFGAAK EGMLGHSIRD VVGDEVYTDI
SKHVHLALKG QRVSYEYAMR RPGGRVVYAR SELVPELDAK GRVAGCFVLS VNITDLKNAQ
AALVHAQKME AVGQLTGGLA HDFNNLLTVV IGNLVSLHER YPDDPDIGEY VAPALKASRR
GASLIKRLLA FARKQPLSLR SVNIAELVSE SMILLKRTLP ANITVTATPM SEAVHAITDV
QQLENALLNL ALNARDAMPE GGQLTIGASC VELGQAQAAD FDVAPGCYVA LSVSDTGTGM
DAATQARASE PFFTTKRFGS GSGLGLSMVY GFAKQSGGGI RIQSALGEGC VVTLVLPCVD
NELEDEPPPD LHHRLARQGA QRPLVLLVED DPDVRRVIRL QLVGLGYPVI EADHAADALL
LLTSVPTVGI LVSDVVMPGG MDGRALCVAA SQRAPHVKAL LISGYSDGEA ASAREAAGFA
LLKKPFTAAE LQHALDGLTA
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