| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3276 |
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| Symbol | |
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| ID | 4688081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3479519 |
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| End bp | 3480154 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836289 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_983495 |
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| Protein GI | 121606166 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0536104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCAGT TATTTGAAGT CCACCCTCTC AATCCGCATG CCCGCCTGCT CGCTCAGGCG
GTGGAGCTGA TCCAGCGCGG CGGAATTGCC GCCGTGCCGA CCGATTCGAG CTACGCGCTG
GTCTGCCAGC TTGACGACAA AGCCGCCTCC GACAACCTGC GCCGCATCCG CGGCGTGGAC
GGCAAGCACC ACCTGACCCT GCTATGCCGC GACCTGAGCG AGCTGGCCAA CTATGCGCGG
GTGGACAACA AGCAGTTCCG CCTGATCAAG GCTGCGACAC CCGGCCCCTA CACCTTCATC
CTCGAAGCCA GCAAGGAAGT GCCGCGCCGC CTCAGCCATC CGTCGCGCAA GACCATTGGC
CTGCGCGTTC CGGACCACAA GACGCTGCAG GCCCTGCTTG AACTCCATGG CGGACCCTTG
CTAGCCACCA CCCTGATTCC GCGCGGCGAA ACCGAATCCA TCAGCGACCC CCAGGACATC
ACCGGCCCGC TGGAGCATGA ACTGGCGGCC ATCATCGACG CCGGCGCCTG CCACAAGGAA
CCCACGACCG TGGTTGACCT GACGACGATG GCGGACGGCG GCGACCCGGT CATCATCCGG
CAAGGCCGGG GCGAACTGGC CGCGCTAGGG CTGTAA
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| Protein sequence | MAQLFEVHPL NPHARLLAQA VELIQRGGIA AVPTDSSYAL VCQLDDKAAS DNLRRIRGVD
GKHHLTLLCR DLSELANYAR VDNKQFRLIK AATPGPYTFI LEASKEVPRR LSHPSRKTIG
LRVPDHKTLQ ALLELHGGPL LATTLIPRGE TESISDPQDI TGPLEHELAA IIDAGACHKE
PTTVVDLTTM ADGGDPVIIR QGRGELAALG L
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