| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3271 |
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| Symbol | |
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| ID | 4688053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3475319 |
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| End bp | 3476203 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836284 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_983490 |
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| Protein GI | 121606161 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.869934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG ACAAACGCCC CGCCGCTTTC TGGTTCCTGG CGCTGTTCTT TGCGCTGTTC
GTGCTGTTCC TATACGGGCC GATGCTGGTC ATCGTGGTGC TGAGCTTCCA GGGGCCGGAA
GGCGGCCTGA CGTTTCCGCT GCGCGGCGTG TCGCTGCACT GGTTTTACAA GCTGGCCGAG
GGGCTGGGCG TGGTCGATAT CGGCGCGGCG CTGATGCGCT CGCTGGGGCT GGGGCTGGCG
GTGATGGCGC TGACCGTGGT GTTCTCGGTG CTCGCCGGGC TGGCGTTTCG CAAGAAGCTG
GCCGGCGGCA ACACGCTGTT CCTGATCGTC GTGGCCAGTT TGATCATGCC GTCCATCATT
GTCTCGCTGG GCATCGGGCT GGAGTTCCGG CTGCTGGACA CCGGCATCAA GCAGGCGCTC
GAATTTTTCG GCATGGCGGA CACGCTCGAA GGCTACGGCA CGGCGCTGGG CCTGTTTACC
TCCGCGCTCG GCGCGCACCT GACCTGGACG CTGCCGTTTG GCCTGCTGAT CATGTTCGCG
ATTTTCAACC GCTTCAACCC GGTCTATGAA GAGGCGGCCC GCGACCTGGG CGCGACGCCG
TGGCAGGGTT TTCGCCATGT GGTGCTGCCC TTGATCGCGC CGTCGGTGGT GGGCATAGCC
ATGTTCGGCT TCACGCTGAG CTGGGACGAG ATTGCCCGCA CCTCGCAGGC GATTGGCGAT
GTGAACACGC TACCGCTGGA GCTGCAGGGC CTGACCAGCA CCGTCACCAC GCCGTCGATT
TACGCGCTTG GGACTGTCAC CACGGTGGTG TCGCTGCTGG TCGTGGGCGC AGCCATCGGC
CTGGCGGGGT GGCTGGGCCG CCGGCAAAAG AAGGGTGCGC GATGA
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| Protein sequence | MTRDKRPAAF WFLALFFALF VLFLYGPMLV IVVLSFQGPE GGLTFPLRGV SLHWFYKLAE
GLGVVDIGAA LMRSLGLGLA VMALTVVFSV LAGLAFRKKL AGGNTLFLIV VASLIMPSII
VSLGIGLEFR LLDTGIKQAL EFFGMADTLE GYGTALGLFT SALGAHLTWT LPFGLLIMFA
IFNRFNPVYE EAARDLGATP WQGFRHVVLP LIAPSVVGIA MFGFTLSWDE IARTSQAIGD
VNTLPLELQG LTSTVTTPSI YALGTVTTVV SLLVVGAAIG LAGWLGRRQK KGAR
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