Gene Pnap_3186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3186 
Symbol 
ID4687490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3383458 
End bp3384711 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content33% 
IMG OID639836199 
Producthypothetical protein 
Protein accessionYP_983405 
Protein GI121606076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.20372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00498843 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATTTTA AGTTGTTGTT TTTCCCACTT TTTATAGGTT TAATATCGGC TCAAAAAATA 
AATTTATTCG GCGAGATATT CGTTGGTGAG TTATTGGCCA TCAGCTATAT GATCTTGCGT
GCTGGAAGAC TCCGCTTATC TACATCTGAG AAAAAAATTG TTGGATTTGG ATTTTTATGG
GTTTGCGCAC AGTTATTTTC TGATTTTTAT AATCAAACTA TATTTTCAGA TGCTATTAAG
GGGGTTTTTA CTCCCGTAGT TTTTATAAGT ACGTTTATAG GGTTGTTAAA TTTTTTAAAA
AGCAATTTTG AAAGATTTCC TTCGTTTGTA TTTGGCACAC TTTGTGGTGG CTTAATCAGT
CTTTTGTTAT TTCCAACGGA ATATTTTTTA GATAATTTTT GGAAGTGGGG GATTGGTAGC
GCTGTAATAG GTCTGATTTA TGTATATTAT TCATTTTTTC TACAAAGAAA AAATTTAGGA
TTATTATTTT TATTATTAAT TGCATTTTCA GTCATTAGTT TGTATTTTGA TGGCAGGAGT
ATGGCGGTTT TTCCATTAAT TGCAATTTTA TGTTATAAAT TATTTGGTGC TAATAGTAGT
CCAGTCATGG CTAAGCCATT TTCGGGTAAG TGGGTTGGGC TAAAATTAAT TATTATTGTT
TTGCCAGTAT TGTTTTGTAT TAACTTAAGC GCTAGTTATT TATTCTCATC GGCTTCCGTG
TTGTCGCACT TTTCGCCAGC TAGCGCTGCC AAATACCAAA CACAAGCAAA TGGTACCTAT
GGAATTTTAC TCGGCGGGCG ATCAGAAATA TTAATATCAG GGAAAGCCTT TTTGGATAAG
CCATGGTTAG GTCACGGGTC ATGGGCTAAG GATAGAAGTG GTTATCTTGA AACTTATGCT
GTTTTGAAAA GTCAACTCGG TTATTCAATG ATGGAGGGTA ATGAGGCGGA AGAATTCGGA
TCTGATTTGT TAATTCCAGC ACACTCATAT TTGATGGGAA CTTTAATTTG GGCAGGAGTT
TTGGGGGGAG TGTTTTGGTT GGTTTTGCTG AATGAAATAG TAAGTATTTT TGTTAAAAAA
ATGAATCTAT TACCGATTTA TTTTTATGCT GGTACTATTG GATTTATATG GAATGTATTT
TTTTCCCCTT TTGGTGCAAA TGCAAGATGG AGTACTTCGA TATTTCTAGC TGGAATTTAT
TCTTATGTAT ATTACCTAAA ACTCAAAAGT AATAATAAAT TTTATGAAAA TTAG
 
Protein sequence
MYFKLLFFPL FIGLISAQKI NLFGEIFVGE LLAISYMILR AGRLRLSTSE KKIVGFGFLW 
VCAQLFSDFY NQTIFSDAIK GVFTPVVFIS TFIGLLNFLK SNFERFPSFV FGTLCGGLIS
LLLFPTEYFL DNFWKWGIGS AVIGLIYVYY SFFLQRKNLG LLFLLLIAFS VISLYFDGRS
MAVFPLIAIL CYKLFGANSS PVMAKPFSGK WVGLKLIIIV LPVLFCINLS ASYLFSSASV
LSHFSPASAA KYQTQANGTY GILLGGRSEI LISGKAFLDK PWLGHGSWAK DRSGYLETYA
VLKSQLGYSM MEGNEAEEFG SDLLIPAHSY LMGTLIWAGV LGGVFWLVLL NEIVSIFVKK
MNLLPIYFYA GTIGFIWNVF FSPFGANARW STSIFLAGIY SYVYYLKLKS NNKFYEN