Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3186 |
Symbol | |
ID | 4687490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3383458 |
End bp | 3384711 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639836199 |
Product | hypothetical protein |
Protein accession | YP_983405 |
Protein GI | 121606076 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.20372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00498843 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTATTTTA AGTTGTTGTT TTTCCCACTT TTTATAGGTT TAATATCGGC TCAAAAAATA AATTTATTCG GCGAGATATT CGTTGGTGAG TTATTGGCCA TCAGCTATAT GATCTTGCGT GCTGGAAGAC TCCGCTTATC TACATCTGAG AAAAAAATTG TTGGATTTGG ATTTTTATGG GTTTGCGCAC AGTTATTTTC TGATTTTTAT AATCAAACTA TATTTTCAGA TGCTATTAAG GGGGTTTTTA CTCCCGTAGT TTTTATAAGT ACGTTTATAG GGTTGTTAAA TTTTTTAAAA AGCAATTTTG AAAGATTTCC TTCGTTTGTA TTTGGCACAC TTTGTGGTGG CTTAATCAGT CTTTTGTTAT TTCCAACGGA ATATTTTTTA GATAATTTTT GGAAGTGGGG GATTGGTAGC GCTGTAATAG GTCTGATTTA TGTATATTAT TCATTTTTTC TACAAAGAAA AAATTTAGGA TTATTATTTT TATTATTAAT TGCATTTTCA GTCATTAGTT TGTATTTTGA TGGCAGGAGT ATGGCGGTTT TTCCATTAAT TGCAATTTTA TGTTATAAAT TATTTGGTGC TAATAGTAGT CCAGTCATGG CTAAGCCATT TTCGGGTAAG TGGGTTGGGC TAAAATTAAT TATTATTGTT TTGCCAGTAT TGTTTTGTAT TAACTTAAGC GCTAGTTATT TATTCTCATC GGCTTCCGTG TTGTCGCACT TTTCGCCAGC TAGCGCTGCC AAATACCAAA CACAAGCAAA TGGTACCTAT GGAATTTTAC TCGGCGGGCG ATCAGAAATA TTAATATCAG GGAAAGCCTT TTTGGATAAG CCATGGTTAG GTCACGGGTC ATGGGCTAAG GATAGAAGTG GTTATCTTGA AACTTATGCT GTTTTGAAAA GTCAACTCGG TTATTCAATG ATGGAGGGTA ATGAGGCGGA AGAATTCGGA TCTGATTTGT TAATTCCAGC ACACTCATAT TTGATGGGAA CTTTAATTTG GGCAGGAGTT TTGGGGGGAG TGTTTTGGTT GGTTTTGCTG AATGAAATAG TAAGTATTTT TGTTAAAAAA ATGAATCTAT TACCGATTTA TTTTTATGCT GGTACTATTG GATTTATATG GAATGTATTT TTTTCCCCTT TTGGTGCAAA TGCAAGATGG AGTACTTCGA TATTTCTAGC TGGAATTTAT TCTTATGTAT ATTACCTAAA ACTCAAAAGT AATAATAAAT TTTATGAAAA TTAG
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Protein sequence | MYFKLLFFPL FIGLISAQKI NLFGEIFVGE LLAISYMILR AGRLRLSTSE KKIVGFGFLW VCAQLFSDFY NQTIFSDAIK GVFTPVVFIS TFIGLLNFLK SNFERFPSFV FGTLCGGLIS LLLFPTEYFL DNFWKWGIGS AVIGLIYVYY SFFLQRKNLG LLFLLLIAFS VISLYFDGRS MAVFPLIAIL CYKLFGANSS PVMAKPFSGK WVGLKLIIIV LPVLFCINLS ASYLFSSASV LSHFSPASAA KYQTQANGTY GILLGGRSEI LISGKAFLDK PWLGHGSWAK DRSGYLETYA VLKSQLGYSM MEGNEAEEFG SDLLIPAHSY LMGTLIWAGV LGGVFWLVLL NEIVSIFVKK MNLLPIYFYA GTIGFIWNVF FSPFGANARW STSIFLAGIY SYVYYLKLKS NNKFYEN
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