Gene Pnap_3184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3184 
Symbol 
ID4686617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3382000 
End bp3382671 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content35% 
IMG OID639836197 
Producthypothetical protein 
Protein accessionYP_983403 
Protein GI121606074 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0223741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00378402 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTAAAG TTATTCTTCA TTTGCTGTTG ATTTTTTTAC CATTTAAGTT AAAACGTTTT 
TTTTACAAAA AATTATTTAA CTTTGAGATA CATACTTCAG CTCGAATTGG CATGTCTCTT
GTGATGCCTG AAGCCTTGTA TATGGATCAA TATTCAAGTA TTGGGAATTT TAATGTAATT
AAAGGAGTGA CAAAAGTTAC TCTTGGCTTG TCTGCATCAA TTAGTAATCT GAATTGGATA
TCGGGTTTTC CAATAAATAC GAATTCGTTG CATTTTTCTG ATCAGAGTAA TAGAGTTCCT
GCATTAATAC TTGGAGATCA TTCGGCGATT ACCAATAGAC ATTTAATTGA CTGTACTGAT
ACGGTAACTT TTGGTCGATT TTCTACTTTT GCAGGATTTA GAAGTCAGAT ATTGACTCAC
AGCATTTCAA TTGTAGATTC TCGTCAGCGA AGTGGTCCTG TCATCATTGG GGATTACACA
TTTACGGGGA CGGGATCAAT TATTCTTCCT AATTCTTTTT TACCGAATTT TTCGGTGTTA
GGTGCTGGAG CCGTTCTTAA CAAAAAATAT AATGAAGAGT ATTTTCTTTA TGCGGGTAAC
CCAGCCCGCC CTGTCAAAAA ACTTGGATGC GATGCGGTTT ATTTTAATCG TAAGACTGGG
TTCGTAAATT AA
 
Protein sequence
MIKVILHLLL IFLPFKLKRF FYKKLFNFEI HTSARIGMSL VMPEALYMDQ YSSIGNFNVI 
KGVTKVTLGL SASISNLNWI SGFPINTNSL HFSDQSNRVP ALILGDHSAI TNRHLIDCTD
TVTFGRFSTF AGFRSQILTH SISIVDSRQR SGPVIIGDYT FTGTGSIILP NSFLPNFSVL
GAGAVLNKKY NEEYFLYAGN PARPVKKLGC DAVYFNRKTG FVN