Gene Pnap_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3166 
Symbol 
ID4686227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3362329 
End bp3363105 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID639836178 
Producthypothetical protein 
Protein accessionYP_983385 
Protein GI121606056 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.819835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.787932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTTT TACTCTCGCC CGCCAAGTCG CTCGACTACG CCACCCCGGC CCATGTGGCC 
GCTCACACCC AGCCGCTGTT CAAGCGCCAG TCGGCCGAAC TGATCGCGGT GCTGAAAGCC
AAATCGCCGC AGGAAATCAG CAGCCTGATG AAGCTGTCGG ATGCGCTGGC CGGCCTGAAC
GTGGCGCGCT ACGAAGCCTG GTCGCCGGCA TTCACCGCCC ACAATTCCAA ACAGGCCGTG
CTCGCCTTCA ATGGCGATGT CTATGCCGGG CTGGACGCCA AGACCCTGGG CGAGGCGCAA
CTGGCCTGGG CGCAAGACCA TTTGTGCATC CTGAGCGGCC TGTACGGCGT GCTGCGCCCG
CTCGACTGGA TGCAGCCTTA CCGGCTCGAA ATGGGCACGG CGCTGGTGAC CGGGCGCGGC
AAAAACCTGT ACCAGTTCTG GGGCGCACAG ATTGCCGACT ACCTGAATGA ACGCGCGGCC
ACCGATGTGT CGCCCGTCAT CGTCAACCTG GCCAGCGAAG AGTATTTCAA GTCGGTCAGC
CGCAAGGTGC TGAAGGCGCG CGTCGTGACC TGCGTGTTCG AGGAGTGGCG CGGCGACAAA
TACAAGATCA TCAGCTTCAT GGCCAAGCGC GCACGCGGCC TGATGGTGCG CTACGCTATT
GAAAATAGGC TGGCAACGGT GGAAAAGCTC AAGGGTTTTG AGGCGGAAGG CTATTGCTTC
GATGCTAGCG CCTCGGCGGT GGACCGGCTG GTGTTCAGGC GCGGGCAGGG CGCTTGA
 
Protein sequence
MLFLLSPAKS LDYATPAHVA AHTQPLFKRQ SAELIAVLKA KSPQEISSLM KLSDALAGLN 
VARYEAWSPA FTAHNSKQAV LAFNGDVYAG LDAKTLGEAQ LAWAQDHLCI LSGLYGVLRP
LDWMQPYRLE MGTALVTGRG KNLYQFWGAQ IADYLNERAA TDVSPVIVNL ASEEYFKSVS
RKVLKARVVT CVFEEWRGDK YKIISFMAKR ARGLMVRYAI ENRLATVEKL KGFEAEGYCF
DASASAVDRL VFRRGQGA