| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2986 |
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| Symbol | |
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| ID | 4687953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3153100 |
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| End bp | 3154941 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639835999 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_983206 |
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| Protein GI | 121605877 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.65391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0634234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTC ATTCAGCAGT TTCAGACATC ACCGCCCGCA TAGTCGAGCG CAGCCGGCCG
ACGCGCAATG CCTATCTGGC TCAATTGCAG GCCGACAGCA GCCGCAAGCC CAGCATGGAC
CGCATGGGCT GCGCCAACAT CGCGCATGCC GTGGCCGGCA TGCCGCTGGA CGACCGCTTC
AAGGTCGTGA CCGAGCGCCG GCCCAACATC GGCATCGTCA CTTCCTACAA CGACATGCTG
TCGGCGCACA CGCCGCTCCT TAGCTACCCG GCGCTGATCA AGGACGAGGC GCGCAAGCAC
GGCGCCACGG CGCAGGTGGC GGGCGGTGTT CCGGCCATGT GCGACGGCGT GACGCAGGGC
ACCAGCGGCA TGGAACTGAG CCTGTTCAGC CGCGACGTGA TCGCCATGGG CACGGCAGTC
GCCCTGTCGC ACGACATGTT CGATGCCGCG CTGCTGCTCG GCGTGTGCGA CAAGATCGTT
CCCGGCCTCT TGATTGGCGC GCTGCAGTTC GGGCATTTGC CGATGGTGTT CGTTCCGGCC
GGCCCCATGC CGTCAGGCCT GCCGAACAAG GAGAAAGCCC GGATTCGCGA ACAGGCCGCG
CAGGGCCTGG TTGGGCGCGA TGCGCTGCTC GAAGGCGAAC TCAAGTCCTA CCACAGCCCC
GGCACCTGCA CCTTTTACGG CACGGCCAAC AGCAACCAGA TGCTGATGGA AGCCATGGGC
CTGCATGTGC CGGGCACCGC CTTTGTCCAG CCGGGCGACA TGCTGCGCGA CGAACTCACG
CGCGAGGCCG CCCGCACCGT CCTTGGCATC ACCAAATCAA AACGCTTTGC GCCCATCGGC
CATGTCGTCG ATGAACGCGC GATTGTCAAC GCCATGGTGG CCCTGCTGGC CACGGGCGGC
TCGACCAACC ACCTGATCCA CTGGGTGGCG GTGGCGCAGT CGGCCGGCAT CGTGATTGAC
TGGAATGACT TTTCGGCGCT GTCCGATGTC GTGCCGCTGC TGACGCATGT CTACCCCAAC
GGCAGCGCCG ACGTGAACCA GTTCCAGGCC GCAGGCGGGC CGGGACTGGT GATCCGCGAA
CTGCTCGACG CCGGGTTCAT GCACGAGGAC GTGCTGACGG TGCGCGCAGG CGGCATCCGC
GAATACGCCA GCGTGCCCGC GCTCGAAGGC GCGGCGCTGG CCTGGCATGC GGTGGGCGAT
TCGAAGGACG AGGCCATCGT GCGCCCGGCC GGCCGGCCGT TCAGCGCCAC CGGCGGCCTC
AAGCTGCTGA CGGGCAACCT GGGCCGCAGC GTGATCAAGG TGTCGGCCGT GCCCGATGAC
CGGCATGTGA TCGAGGCGCC GGCCCGGGTG TTTGATTCGC AGGAGGATTT GCTGCTGGCC
TTCAATTCCG GCGAACTGGA ACGCCTGTGC AATGAAACCG CCGCGCGCGG CGTGGTCTGC
GTGGTGCGCT GGCAAGGCCC GCAGGCCAAC GGCATGCCCG AGCTGCACAA GCTCACGCCG
CCGCTGGCGG TGCTGCAGGG CAAGGGCTTC ATGGTCGCGC TGGTGACCGA TGGCCGCATG
AGCGGCGCGT CGGGCAAGGT GCCGGCGGCG ATTCACGTCT CGCCCGAAGC GGCTGCCGGC
GGCCCGCTGG CCAAGGTGGT CGATGGCGAC GTGGTGCGCG TCGATGCGCT CACGGGTGAA
TTGCGCGTAT TGGTCGATGA GGCCGAATGG GCGGCGCGGC CAGCCAGCAT CATGCCGGAC
GAATTGCGCC GGCAGAACGG CGTTGGCATG GGCCGGGGAT TGTTTACCGG GATGCGCCGC
CATGCGCTGA CCGCAGAAGA AGGAGCTTTG TCATGGATGT AA
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| Protein sequence | MALHSAVSDI TARIVERSRP TRNAYLAQLQ ADSSRKPSMD RMGCANIAHA VAGMPLDDRF
KVVTERRPNI GIVTSYNDML SAHTPLLSYP ALIKDEARKH GATAQVAGGV PAMCDGVTQG
TSGMELSLFS RDVIAMGTAV ALSHDMFDAA LLLGVCDKIV PGLLIGALQF GHLPMVFVPA
GPMPSGLPNK EKARIREQAA QGLVGRDALL EGELKSYHSP GTCTFYGTAN SNQMLMEAMG
LHVPGTAFVQ PGDMLRDELT REAARTVLGI TKSKRFAPIG HVVDERAIVN AMVALLATGG
STNHLIHWVA VAQSAGIVID WNDFSALSDV VPLLTHVYPN GSADVNQFQA AGGPGLVIRE
LLDAGFMHED VLTVRAGGIR EYASVPALEG AALAWHAVGD SKDEAIVRPA GRPFSATGGL
KLLTGNLGRS VIKVSAVPDD RHVIEAPARV FDSQEDLLLA FNSGELERLC NETAARGVVC
VVRWQGPQAN GMPELHKLTP PLAVLQGKGF MVALVTDGRM SGASGKVPAA IHVSPEAAAG
GPLAKVVDGD VVRVDALTGE LRVLVDEAEW AARPASIMPD ELRRQNGVGM GRGLFTGMRR
HALTAEEGAL SWM
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