Gene Pnap_2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2974 
Symbol 
ID4688830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3142370 
End bp3143095 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content68% 
IMG OID639835987 
Producthydrolase 
Protein accessionYP_983194 
Protein GI121605865 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.784052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.164657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGCA ACGAAATGGA AGGATATGCA TTGAGCCCCT TGCTCGACTG GAAAGAGATC 
GACCTCGTCG TGTTCGACGT GGACGGAACG CTGTACGACC AGCGGCGCCT GCGCCTGGCC
ATGCTGCGCT GCCTGCTGGC GGCCACATGG CAGACACGCA GCCTGGACAC GCTGCGGACC
TTGCGCACCT TTCGCCACGT CCGGGAAGCG CTCGGCGACC ATCCGGAGGC CGATTTCATG
CGCCTGCAAT ATGCCCGGAC GGCGGCACGG CACCACAAGA CCGAGGGCGA GGTGCGCGCC
CTGACCGACG AATGGATGGA GCGCAAGCCC TTGCCGTTTC TGGCCGGCTG CCGCTACCCG
CACCTGGACA CGCTGTTTGC CGGCTTGCGC GGCGCAGGCA AGCAAGTCGC GGTGTTTTCC
GACTATCCGG CCACGGACAA GCTGGCGGCC CTCGGGCTGC GGGCCGCGCC TGTCGTCTGC
GCCACCGATG CCGGCGTGGC CCGACTCAAG CCCGACCCTT GCGGCCTGCT GTCCATCCTG
CGCCAGACGG GTGTGCCGGC GCAGCGCGCG CTGATGATCG GCGACCGGTT TGACCGTGAC
GCCGTCGCCG CCAGCCGGGC CGGCATGCGC GCCCTGATTC GCGCCGGCAA GCCGCATCCG
TTGTTCGACA CCTTTCGCGC CTACGACGAC CCGGTGTTCC AGCCCATGCA GAGCCGGCCT
GCTTGA
 
Protein sequence
MACNEMEGYA LSPLLDWKEI DLVVFDVDGT LYDQRRLRLA MLRCLLAATW QTRSLDTLRT 
LRTFRHVREA LGDHPEADFM RLQYARTAAR HHKTEGEVRA LTDEWMERKP LPFLAGCRYP
HLDTLFAGLR GAGKQVAVFS DYPATDKLAA LGLRAAPVVC ATDAGVARLK PDPCGLLSIL
RQTGVPAQRA LMIGDRFDRD AVAASRAGMR ALIRAGKPHP LFDTFRAYDD PVFQPMQSRP
A