| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2956 |
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| Symbol | clpX |
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| ID | 4689266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3116153 |
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| End bp | 3117418 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639835968 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_983176 |
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| Protein GI | 121605847 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00705391 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCCGAGA AAAAAGGCTC CTCCAGCGAA AAGACTTTGT ACTGCTCCTT CTGCGGTAAA
AGCCAGCATG AAGTCAAAAA ACTGATTGCT GGCCCATCCG TCTTTGTTTG TGATGAGTGT
ATTGATCTGT GCAATGAAAT CATCCGCGAC GAATTGCCTT CAGGCAGTGA GGCAGGCGAA
GCGCGCAGTG ATTTGCCAAC GCCTGCGGAG ATCAAGGCCA CGCTTGATGG TTATGTGATT
GGACAGGAAC CCGCCAAGCG CACGCTGGCG GTTGCCGTGT ACAACCACTA CAAGCGGCTG
CGCCACAAGG AATCAGCCAA AAAAGACGAT GTCGAGCTGA CCAAGAGCAA CATCCTGCTG
ATCGGCCCCA CCGGCTCCGG CAAGACCCTG CTCGCTCAAA CGCTGGCCAG AACGCTGAAT
GTGCCTTTCG TCATGGCCGA CGCCACGACG CTGACCGAGG CCGGCTATGT GGGTGAAGAC
GTCGAAAATA TCATCCAGAA ATTGCTGCAA AGCTGCAATT ACGAAGTTGA TCGTGCCCAG
CAAGGGATTG TCTACATCGA CGAAATCGAC AAGATTTCCC GTAAATCCGA CAACCCCTCC
ATCACTCGCG ATGTGTCTGG CGAAGGGGTT CAGCAAGCAT TGCTGAAACT GATGGAAGGA
ACAATGGCTT CCGTGCCTCC CCAAGGCGGG CGCAAGCATC CAAACCAGGA TTTTCTCCAG
GTTGACACCA CCAACATCCT CTTTATTTGC GGCGGTGCTT TTTCGGGACT TGAAAAGGTG
ATTGAAAACC GGACCGAAGC CTCCGGGATT GGTTTTGGCG CTGCCGTCAA AAGCAAAAAA
GCGCGCAGCC TGACGGAAGC CTTCAAGGAT GTCGAGCCTG AAGACCTGAT CAAGTTTGGC
TTGATTCCCG AACTGGTCGG CCGTATGCCG GTGATCGCTA CGCTGGCGGA ACTCAGTGAA
GATGCACTGG TTCAGATCTT GACGGAGCCT AAAAATGCCG TGGTCAAGCA GTTCAGCAAG
CTGCTTGCCA TGGAAGGCGT TGATCTCGAA ATCAGGCCTT CGGCATTGAA AGCCATTGCC
CGCAAGGCAC TGGCCCGAAA AACCGGTGCG CGCGGTCTGC GTTCGATTCT GGAGCAATCC
TTGATTGACA CCATGTTTGA TTTACCCACT ACCAGTAATG TCGCCAAGGT GGTTGTGGAT
GAATCCACGA TTGAAGAAAA CAAGCCGCCT TTGTTGGTAT ACCGCGAAGC CGCTAAAAAA
GCCTGA
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| Protein sequence | MAEKKGSSSE KTLYCSFCGK SQHEVKKLIA GPSVFVCDEC IDLCNEIIRD ELPSGSEAGE
ARSDLPTPAE IKATLDGYVI GQEPAKRTLA VAVYNHYKRL RHKESAKKDD VELTKSNILL
IGPTGSGKTL LAQTLARTLN VPFVMADATT LTEAGYVGED VENIIQKLLQ SCNYEVDRAQ
QGIVYIDEID KISRKSDNPS ITRDVSGEGV QQALLKLMEG TMASVPPQGG RKHPNQDFLQ
VDTTNILFIC GGAFSGLEKV IENRTEASGI GFGAAVKSKK ARSLTEAFKD VEPEDLIKFG
LIPELVGRMP VIATLAELSE DALVQILTEP KNAVVKQFSK LLAMEGVDLE IRPSALKAIA
RKALARKTGA RGLRSILEQS LIDTMFDLPT TSNVAKVVVD ESTIEENKPP LLVYREAAKK
A
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