Gene Pnap_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2871 
Symbol 
ID4686746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3013912 
End bp3014694 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID639835877 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_983091 
Protein GI121605762 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.737605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.416254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTG CTGTTTTAAT TGAAATTTCG GACTCCCTGG CAACGGTCAC GCTGTCGCAT 
CCCGGCAAGT TCAACGCCAT GTCGCGCGTG ATGTGGCGCG AGTTGCGTGC CGCTTTTGAG
GCCATCCAGC AGCGCCGTGA TGTGCATTGC GTGCTGGTGC GGGGTGACAG CGGCCATTTT
TGCGCGGGCG GCGATATTTC CGAATACGCC GGTTTTCGCT TCGAGGAGGC CAGCCTGCGC
GACTTCCATG AAAACGATGT CTGGGGCGGC CTGCAGGCGA TGCTCGATTG CGACGTGCCC
ATCCTTGCGC AGATCGAGGG CAACTGCATG GGCGCGGGCG TCGAGATTGC CAGCTGCTGC
GATATCCGCA TGGCCGCCGA CAGCGCCCGC TTTGGCGCGC CGATTGCCCG GCTCGGCTTT
CCGATGGCGC CGCGCGAGGC GGCGCTGGTG ATGCGCGCCG TGGGCGAGTT GACGGCGCGC
GAGATGCTGC TGTCGGCCGC CGTGCTGGAC GCGGCCGAGA TGAAGCAGCG CGGCTTTCTG
AACCAGCTGC TTGCGCCCGA TGCGCTGGAC GCTGCGGTGC AGGAGCGCAT GCATCGCATC
CGGCAACTGG CGCCGCAGGC CGCGCGCCTG AATAAAGCAT CATTTAGGGC TCTTGCGCAT
GTCCAGCCTG CGCAAGCAGC TATAGATTTA ATAGCGACTG CGTATGACTA CGCGGATTCT
GGCGAGCACC GTGAAGGCAT AGGTGCCTTC ATGGAAAAGC GTCCACCGGC GTTCAGCGCA
TGA
 
Protein sequence
MSGAVLIEIS DSLATVTLSH PGKFNAMSRV MWRELRAAFE AIQQRRDVHC VLVRGDSGHF 
CAGGDISEYA GFRFEEASLR DFHENDVWGG LQAMLDCDVP ILAQIEGNCM GAGVEIASCC
DIRMAADSAR FGAPIARLGF PMAPREAALV MRAVGELTAR EMLLSAAVLD AAEMKQRGFL
NQLLAPDALD AAVQERMHRI RQLAPQAARL NKASFRALAH VQPAQAAIDL IATAYDYADS
GEHREGIGAF MEKRPPAFSA