| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2862 |
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| Symbol | |
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| ID | 4687075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3003498 |
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| End bp | 3004658 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639835869 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_983083 |
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| Protein GI | 121605754 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.6418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0284463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TTGTACTGGT TATGGCCATG TCGGCAATCC TGCTGGCCGC CTGCGGCAAA
AAAGAGGAGC CCGTGGCGGT CGCTCCCGCG CCCGCGCCCG TGGCATCAGC CCCGGCGCTA
CCGGTCAATA CCGAGGAGAA GGTGCTCAAC ATCTACAACT GGCCCGACTA CATTCCGGAA
GGCATGATCG CCGCCTTTGA AAAGGAAACC GGCATCAAGG TCAATTACGA CACCTTTGAA
ACCAATGAAG CCCTGCATGC CAAGCTGGTG GCGGGCAATA CCGGCTATGA CATCGTGGTG
CCGGGCACGG TGTTCGCCAA GCCGCAGATC GAAGGCGGGC TGCTGCAGCC ACTGGACAAG
TCCAAGATCA AGAACCTGGC CAACCTGGAC CCGGCCATCA TGGGCGTTCT GACCAAGGCC
GACCCGGGCA ACAAGTACCT GGTGCCATGG GCCTGGGGTT TCACCACCGT CGGCATCAAC
AAGACCAAGG CCGAAAAAGC CCTGGCTGGC CTGCCCATGC CTGACAACGC CTGGGATCTG
GTGCTCAACC CCAAGTACAC AGCCAAGCTC AAGTCCTGCG GCATTGCTTA CCTGGACTCG
CCTGCCGAGA TCATGCCGGC GGCGCTGCAC TACATCGGCA AGGATGCTTA CTCCAACGAC
CCGGCCGATT ACAAGGCCGC CGCCGAGGCG CTGGCCAAGG TGCGCAAGGA TATCCGCCTG
TTCAGCGCGA CCATGATCGA CGACGTGGCG GGCGGCAAGG CCTGTGCGGT CATTGGCTGG
TCGGGCGACA TCAACATCGC AGCCGGCCGG GCCAAGGAAA ACGGCTCCAA GGATGAAATC
CAGGCCCTGC TGCCCAGCAC CGGCGCCCTG CTGTTTTCTG ACACCATGGC CATTACCAAG
GATGCCAAGC ATCCGAACAA TGCCCATGCC TTCATCGACT TCTACCTGCG TCCCGAGAAC
GCCGCCTCGG TGACCAACAC CATGAACTAC CCCACGGCCA ACAAGGCCGC CATTGCCCAG
ATCAAGCCCG AGATTGCCGG CAACAAGACC ATCTTTGTGG AAGCTGACTA TTTCAGCAAG
ATGATTCCCC CGAGCAGCTT CACCAATGAA GCCCGCGAAG CCATGGCCAA TGCCTACAAC
AGCTTCAAAA AAGGCAAGTA A
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| Protein sequence | MKKLVLVMAM SAILLAACGK KEEPVAVAPA PAPVASAPAL PVNTEEKVLN IYNWPDYIPE
GMIAAFEKET GIKVNYDTFE TNEALHAKLV AGNTGYDIVV PGTVFAKPQI EGGLLQPLDK
SKIKNLANLD PAIMGVLTKA DPGNKYLVPW AWGFTTVGIN KTKAEKALAG LPMPDNAWDL
VLNPKYTAKL KSCGIAYLDS PAEIMPAALH YIGKDAYSND PADYKAAAEA LAKVRKDIRL
FSATMIDDVA GGKACAVIGW SGDINIAAGR AKENGSKDEI QALLPSTGAL LFSDTMAITK
DAKHPNNAHA FIDFYLRPEN AASVTNTMNY PTANKAAIAQ IKPEIAGNKT IFVEADYFSK
MIPPSSFTNE AREAMANAYN SFKKGK
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