| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2859 |
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| Symbol | |
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| ID | 4686942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3000503 |
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| End bp | 3001363 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639835866 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_983080 |
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| Protein GI | 121605751 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.163733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0234889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TTCTGGAAAA GCATTTCAGC AAGCTGTGGC TGGCGCTGGT GTACCTGTTT
TTGTACCTGC CGCTGATTTT CATGATCGTT TTCTCGTTCA ACAGCACCCG GCAGGACGCC
GAGTTCACCG GCTTTTCGCT GCGCTGGTAT GAGGCCCTGA CCCGCGACAC CAAGATTGTT
GAAGGCTTTT GGCTGTCCCT GAAGGTGGCG ACCGTTTCCG GGCTGCTGTC GGCCCTGCTG
GGCACGTTTT CGGCCTTTGT GCTGGTGCGC TACCGGCGCT TTGGCGGCCG CACCATTTTC
TCGGGCATGG TCAATGCGCC TTTGGTGATG CCGGAAGTGG TCATCGGCCT GTCGCTGCTG
CTGCTGATGG TCGGCGCGCA AAACTTCCTG GGCTGGCCGC AGCGTGGCAT GCTGACCATC
ATCTTCGGCC ACACCCTGCT GGGCATGGCG TATGCCATGG TGGTTGTGCA GTCGCGGCTG
CTGGAGGTGA ACCGTTCGAT TGAAGAAGCC GCCATGGACC TGGGCGCCCG GCCGCACCAG
GTGTTTTTCC TGATCACGCT GCCCAACATC TTCCAGGCCA TCCTGGCGGC TTTTCTGCTG
TCCTTCACCC TGTCATTCGA TGATGTGGTG ATTGCAGAAT TTTTGTCCGG CCCGGGCGTC
AACACCCTGC CGCAGGTGAT TTTTGGCTAT GCCCGGCGCG GCATCAACCC GACCATCTAC
GCGGCGGCTA CCTTGCTGAT TGCCACGGTA ACGATGGTCA TCGTTGGCTA CAGCGTCTGG
GTGGCGCGGC AAACCCGCCA GCGTGAACGC GAGATTGCCG CCGCCACCCG GGCCGAACTG
ACGGCGCTGG GCGTCATCTG A
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| Protein sequence | MKNFLEKHFS KLWLALVYLF LYLPLIFMIV FSFNSTRQDA EFTGFSLRWY EALTRDTKIV
EGFWLSLKVA TVSGLLSALL GTFSAFVLVR YRRFGGRTIF SGMVNAPLVM PEVVIGLSLL
LLMVGAQNFL GWPQRGMLTI IFGHTLLGMA YAMVVVQSRL LEVNRSIEEA AMDLGARPHQ
VFFLITLPNI FQAILAAFLL SFTLSFDDVV IAEFLSGPGV NTLPQVIFGY ARRGINPTIY
AAATLLIATV TMVIVGYSVW VARQTRQRER EIAAATRAEL TALGVI
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