| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2790 |
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| Symbol | |
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| ID | 4687620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2933298 |
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| End bp | 2935967 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639835798 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_983013 |
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| Protein GI | 121605684 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0140578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00260367 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCAGT TCGCAAAAGA AACCCTGCCC ATCAGTCTTG AAGAGGAGAT GCGAAGAAGC
TACCTCGACT ATGCGATGAG CGTTATTGTG GGCCGGGCGC TTCCCGACGC ACGTGACGGA
CTCAAACCCG TGCACCGGCG TGTGCTCTTC GCCATGCACG AGTTGAACAA CGACTGGAAC
CGGCCTTACA AGAAATCTGC CCGTATTGTG GGCGATGTGA TCGGCAAATA CCATCCTCAC
GGAGACCAAT CGGTCTATGA CACCATCGTT CGCATGGCCC AGGATTTCTC GCTGCGTCAC
TTGCTGGTGG ACGGCCAGGG GAACTTCGGC TCAGTTGATG GCGACAGCGC TGCGGCAATG
CGCTACACGG AAATACGCCT TTCGAAGATC GCGCATGAGT TGCTGGCTGA TCTGGACAAG
GAGACTGTTG ACTTCGGCCC CAACTACGAT GGCAGCGAAC AGGAGCCGCT GGTCATGCCG
ACCCGCCTGC CCAACTTGCT GGTCAATGGC TCAGGCGGCA TTGCCGTAGG CATGGCTACC
AACATTCCGC CGCACAACCT GAATGAAGTG GTCGATGCCT GCCTGCATCT GCTGAAGAAT
CCGGAAGCCT CCATTGATGA ACTGATGGAA ATCATTCCTG CGCCGGACTT CCCTACCGGC
GGCATCATCT ACGGCATCAA CGGCGTCAAG GATGGCTACC GCACGGGACG CGGCAGGGTG
GTCATGCGCG CCAAATGCCA TTTTGAGGAC ATCGACAAGG GCCAGCGCCA GTCCATCATC
GTCGATGAAC TGCCTTACCA GGTCAACAAA AAGACACTTC AGGAGCGCAT GGCCGAACTG
GTTCATGAGA AGAAAATCGA GGGCATCAGC CACATTCAGG ATGAAAGCGA CAAATCCGGG
ATGCGTCTGG TCATCGACCT CAAGCGTGGC GAAGTGCCCG AGGTCGTGCT GAACAATCTG
TACAAACAGA CCCAGTTGCA GGATACCTTC GGCATCAACA TGGTGGCGCT GATTAATGGC
CAGCCCAAGC TGTGCAACCT GAAGGATCTG ATCCAGGTTT TCATTTCCCA CCGCCGAGAA
GTGGTGACAC GCCGCACGGT GTTCACGCTG CGCAAGGCAC GCGAACGCGG CCATGTTCTG
GAAGGCCTGG CCGTCGCACT GGCCAATATT GACGAGTTCA TTGCCATCAT TCGCAATGCA
CCGACGCCTC CCGTAGCGAA GGCCGAGTTG ATGACACGCG CATGGGACAG CAGCCTGGTG
CGCGAAATGC TCACCCGCGC ACACGCCGAT GGCGGCGTGG TCAATGCCGA TGATTACCGT
CCCGATGGAC TTGAGAAATC ATTTGGCATG GGCAGCGACG GCCTTTACCG CCTGTCGGAA
ACCCAGACCC AGGAAATTCT GCAGATGCGC CTGCAGCGCC TGACCGGCCT GGAACAGGAC
AAGATCGTTG CCGAATACAA GGAAGTCATG GCCGAGATTG ATGACCTGCT CGACATTCTG
GCCAGGCCAG AGCGGGTTTC CACCATCATT GGGCAAGAGC TGGCAGCCAT CAAGCTGGAA
TTCGGTCAGA CCAAGCTGGG CGCTCGGCGC AGCCATATTG AGCACAGTTC ATTTGACCTG
AGTACCGAGG ACCTGATCAC CCCGACCGAC ATGGTGGTCA CGCTGTCGCA CACAGGCTAT
ATCAAGAGCC AGCCCCTGTC AGAATACCGG GCGCAAAAGC GTGGTGGTCG TGGAAAACAG
GCCACGGCCA CCAAAGAAGA CGACTGGGTT GACCAGTTGT TCATTGCCAA TACCCACGAC
TACATCCTCT GCTTTTCAGA CCGGGGCCGG CTCTACTGGC TCAAGGTATG GGAAGTGCCG
GCGGGCTCAC GCGGCTCGCG TGGCCGGCCG ATTGTCAACA TGTTCCCGCT GCAGGAAGGT
GAAAAAATCA CTGTGGTCCT GGCACTGACG GGTGAAAAAC GCAGTTTCCC GGCTGACCAG
TATGTTTTCA TGGCCACTTC CATGGGTACC GTCAAGAAAA CGCCCCTGGA CGATTTCAAC
AACCCCCGCA AGGGCGGCAT TATTGCCGTG GCACTGGACG AGGGAGACTA CCTGATCGGC
GCCGCGCTCA CCGATGGAAA GCACGACGTG ATGCTGTTCA GCGATGGCGG CAAAGCGGTT
CGTTTTGATG AAAATGATGT GCGCCCCATG GGCCGCAATG CGCGAGGCGT GCGCGGCATG
AACCTGGAAG AAGGCCAGGG CGTGATCGCC ATGCTGGTAG CGGAAGACGG TGAACAAAGC
GTGCTGACTG CCACCCAAAT GGGTTTTGGC AAGCGCACGT CCATCAGTGA ATACACCCGA
CATGGCCGCG GCACCAAGGG CATGATTGCC ATCCAGCAAA GTGAACGTAA CGGCAAGGTC
GTTGCAGCGA CACTGGTTCA TGCTGACGAT GAAATCATGC TGATCACTGA CAGGGGTGTA
CTGGTTCGTA CGCGCGTCAG CGAAATCCGG GAAATGGGCC GCGCCACCCA AGGCGTTACG
CTCATAGGTC TGGATGAAGG TTCGCAGTTA AGCGGCCTCC AGCGAATCGT CGAGAACGAT
GCCACGCTGG ACGATACAGA AAAAACCGTC GATACCGATA CTGGAAACGA CGCAGGCAAC
GATGCCGCCA ACCCGGAAAC CAATTCATGA
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| Protein sequence | MTQFAKETLP ISLEEEMRRS YLDYAMSVIV GRALPDARDG LKPVHRRVLF AMHELNNDWN
RPYKKSARIV GDVIGKYHPH GDQSVYDTIV RMAQDFSLRH LLVDGQGNFG SVDGDSAAAM
RYTEIRLSKI AHELLADLDK ETVDFGPNYD GSEQEPLVMP TRLPNLLVNG SGGIAVGMAT
NIPPHNLNEV VDACLHLLKN PEASIDELME IIPAPDFPTG GIIYGINGVK DGYRTGRGRV
VMRAKCHFED IDKGQRQSII VDELPYQVNK KTLQERMAEL VHEKKIEGIS HIQDESDKSG
MRLVIDLKRG EVPEVVLNNL YKQTQLQDTF GINMVALING QPKLCNLKDL IQVFISHRRE
VVTRRTVFTL RKARERGHVL EGLAVALANI DEFIAIIRNA PTPPVAKAEL MTRAWDSSLV
REMLTRAHAD GGVVNADDYR PDGLEKSFGM GSDGLYRLSE TQTQEILQMR LQRLTGLEQD
KIVAEYKEVM AEIDDLLDIL ARPERVSTII GQELAAIKLE FGQTKLGARR SHIEHSSFDL
STEDLITPTD MVVTLSHTGY IKSQPLSEYR AQKRGGRGKQ ATATKEDDWV DQLFIANTHD
YILCFSDRGR LYWLKVWEVP AGSRGSRGRP IVNMFPLQEG EKITVVLALT GEKRSFPADQ
YVFMATSMGT VKKTPLDDFN NPRKGGIIAV ALDEGDYLIG AALTDGKHDV MLFSDGGKAV
RFDENDVRPM GRNARGVRGM NLEEGQGVIA MLVAEDGEQS VLTATQMGFG KRTSISEYTR
HGRGTKGMIA IQQSERNGKV VAATLVHADD EIMLITDRGV LVRTRVSEIR EMGRATQGVT
LIGLDEGSQL SGLQRIVEND ATLDDTEKTV DTDTGNDAGN DAANPETNS
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