| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2709 |
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| Symbol | |
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| ID | 4689039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2856788 |
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| End bp | 2857618 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639835717 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_982932 |
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| Protein GI | 121605603 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0194596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.675227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATT CCACACACCA CTGGCTGGGC CTTGAGGGCC GTATCTGCGT TGTCACCGGC
GCTGCCAGCG GCATCGGCGC GGCCATCGCG CGCAGCCTGG CCCAGGCCGG CGCCCGCGTC
GCGCTGCTCG ACCGCGACAC GGCGGGCTGC GAAAAAGTGA CCGCCGAATT GCGCGCCCAA
GGCGCCGACG CTATTAGCCT GACCTGCGAC ATTGCCAGCG AAGCGAGCGT GAATGCCGCC
GCAGCGCGCG TGCAGGACGA ACTCGGCGCC TGCCATGCCC TGATCAACAA TGCCGGCCTG
CTGCGCTCGG GCGGCTTGGC CGACGTGAGC CTGGACGACT GGAACTCGGT GCTGTCCATC
AACCTGACCG GCTACCTGCT GTGCGCCCGG GCTTTTTCAA AGCCGATGCG CGAGGCCGGC
CTGGGCAGCA TCGTGAATGT CGCGTCGATC TCTGCCCTGT TCCCGCAGAC CGGCAGCGGC
GCCTACAGCG CCAGCAAGGC CGGCGTGCTG CTGATGTCGC GCCAGATGGC GGTCGAATGG
GGGCCGCAGG GCATCCGCAG CAATGCGATC TGCCCCGGCA TGATCCGCAC CGCGCTGTCG
GCCCGGTTTT ATGAAGAACC CGGCTTCGAG CAAAAGCGCG CCGCCGTCAC GGCCAACCGC
CGCGTCGGCG AGCCGCAGGA CATTGCCGAT GTGGCGCTGT TCCTGGCCAG CCCGCGCTCG
GCCTATGTCA ATGCCGCCGA AATCGTGGTC GATGGCGGCA TGAGTTCAAT GCTCATGGAC
ATGGTGCCGC GCCCCGGCTT CAACCAGTCC CGTCCCGCCG CCCACGCCTG A
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| Protein sequence | MLDSTHHWLG LEGRICVVTG AASGIGAAIA RSLAQAGARV ALLDRDTAGC EKVTAELRAQ
GADAISLTCD IASEASVNAA AARVQDELGA CHALINNAGL LRSGGLADVS LDDWNSVLSI
NLTGYLLCAR AFSKPMREAG LGSIVNVASI SALFPQTGSG AYSASKAGVL LMSRQMAVEW
GPQGIRSNAI CPGMIRTALS ARFYEEPGFE QKRAAVTANR RVGEPQDIAD VALFLASPRS
AYVNAAEIVV DGGMSSMLMD MVPRPGFNQS RPAAHA
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