Gene Pnap_2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2625 
Symbol 
ID4690197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2762407 
End bp2763798 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content62% 
IMG OID639835632 
Productethanolamine transproter 
Protein accessionYP_982848 
Protein GI121605519 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00908] ethanolamine permease 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.193945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTA TCAAGAATTT GCACGCCGCA CAGGTGCTCA ACCCGGTGCT CAGCACCCTG 
CAGCTGTGGG GTATCGCCGT CGGGCTGGTG ATTTCCGGCG AATATTTCGG CTGGAGCTAC
GGCTGGGCGT CGGCCGGCAC GCTGGGCTTC ACGATCACCT CGATTTTCAT CGCGGCGATG
TACGCCACCT TCATCTTCAG CTTCACCGAG CTGACCACCT CGATTCCGCA TGCCGGCGGA
CCGTTCGCCT ACAGCAAGCG CGCCTTCGGC CCCACGGCGG GCTATCTGGC GGGTGCGGCC
ACGCTGATCG AGTTTGTCTT CGCGCCACCC GCGATTGCAC TGGCCATTGG CGCCTACCTG
AATGTGCAAT TCCCGGCGCT CGACCCCAAG GTGGCCGCCG TCGGCGCCTA CCTGGTGTTC
ATGACGCTCA ACATCGTGGG CGTGCAGATC GCCGCCACGT TCGAGCTGGC GGTCACCTTG
CTGGCGATTT TCGAGCTGCT GGTGTTCATG GGCGTGGTGG CGCCCGGTTT TTCGATGGCC
AACTTCACCA AGGGCGGCTG GTCGGGAATG GACAGCTTCA GCCCGGCCTC GATTCCCGGC
ATGTTTGCCG CGATTCCGTT TGCGATCTGG TTCTTTTTGG CGATTGAAGG CGTGGCCATG
GCGGCCGAAG AGGCCAAAGA CCCCAGGCGC TCGATTCCGA TTGCCTACAT CACGGGCATT
TTGACGCTGG TGCTGCTGGC CATTGGCGTG ATGGTGTTCG CCGGCGGCAC GGGCGACTGG
ACCAAGCTGG CCAACATCAA CGACCCGCTG CCGCAAGCCA TGAAGACCAT CGTCGGCGAG
AACAGCGGCT GGCTGCACAT GCTGGTCTGG CTGGGCCTCT TTGGGCTGGT GGCCTCGTTC
CACGGCATCA TCCTGGGCTA TTCGCGCCAG ATTTTTGCAC TGGCGCGCGA AGCCTACCTG
CCAGCCTACT TCGCCAGCGT GCATCCGCGC TTCAAGACCC CGCACCGCGC CATCCTGGCG
GGCGGCGTGG TGGGCCTCGC CGCCATCTAC AGCGACGAGC TGATCAAGAT CGGCGGCCTG
ACGCTGACCG CCAACATCGT CACCATGGCG GTGTTCGGCG CGATTTTGAT GTACATCATC
AGCATGCTGA GCCTGTTCCA GCTGCGCCGT ACCGAGCCCA ACATGAATCG CCCCTTCCGC
GCGCCTTGCT ACCCCTACTT CCCGGCCTTC GCGCTGCTGG GCGCCTGTGT CTGCATGGCG
ACGATGGTGT ATTACAACCC GCTGATTTTT GGCCTCTTCG TGGCGTTCAT GGCAATTGGT
TACTTCTATT TCCTGCTGAC CGCCCAGAAT AGAAGCAACG CAACACCAGC TACCCTGCCA
AATTTGATCT GA
 
Protein sequence
MKPIKNLHAA QVLNPVLSTL QLWGIAVGLV ISGEYFGWSY GWASAGTLGF TITSIFIAAM 
YATFIFSFTE LTTSIPHAGG PFAYSKRAFG PTAGYLAGAA TLIEFVFAPP AIALAIGAYL
NVQFPALDPK VAAVGAYLVF MTLNIVGVQI AATFELAVTL LAIFELLVFM GVVAPGFSMA
NFTKGGWSGM DSFSPASIPG MFAAIPFAIW FFLAIEGVAM AAEEAKDPRR SIPIAYITGI
LTLVLLAIGV MVFAGGTGDW TKLANINDPL PQAMKTIVGE NSGWLHMLVW LGLFGLVASF
HGIILGYSRQ IFALAREAYL PAYFASVHPR FKTPHRAILA GGVVGLAAIY SDELIKIGGL
TLTANIVTMA VFGAILMYII SMLSLFQLRR TEPNMNRPFR APCYPYFPAF ALLGACVCMA
TMVYYNPLIF GLFVAFMAIG YFYFLLTAQN RSNATPATLP NLI