Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2574 |
Symbol | |
ID | 4687903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2709588 |
End bp | 2710121 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639835582 |
Product | transposase and inactivated derivative |
Protein accession | YP_982798 |
Protein GI | 121605469 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3415] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0224006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000135385 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTTATCCC AGCAAATCAT TGATCAGCTG CAGCCCTATG ATTTCGACCG GCTGGCTCGC AAGGAACCCG ATGGGCGCCG GCGACTGCGC CTGATAGCAC TGGCGCACCT CAAAGAAGGC AAAAGCTGCA GCGAAGTGGG CGCGGCACTG CGCGTGAGCC GCCACGCGGT CATGCGCTGG GTACAGTGGT TTACCGCTGG CGGCGTGGCC CGTCTGGCCG GCATGCCGCA CGACTGGAGC ACGCAGCGCC TTGCCAAAGC ACAGGAAGAA GCCTTTCGCC AGGCCGTCGA ACAACTCCAG TGCGAACGCG GCGGTGGGCG GGTTCGGGGT GAAGATATTC GCCAGTTGTT GGACCGGCAG TTTGGCGTTG CCTACAGCTT GAACGGTGTG TATGACCTCA TGAAGCGCTT GGGCATGGTA TGGATTTCGG CGCGCGCCGT CAGTCCCAGT GCCGATCCGG TGGCACAAGC CGAATTCAAA AAAAAACTTC GTCCAGGAAG TCGCGGCAAC GCTGCCCCCG AGCATTGCGC CTGA
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Protein sequence | MLSQQIIDQL QPYDFDRLAR KEPDGRRRLR LIALAHLKEG KSCSEVGAAL RVSRHAVMRW VQWFTAGGVA RLAGMPHDWS TQRLAKAQEE AFRQAVEQLQ CERGGGRVRG EDIRQLLDRQ FGVAYSLNGV YDLMKRLGMV WISARAVSPS ADPVAQAEFK KKLRPGSRGN AAPEHCA
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