| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2563 |
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| Symbol | |
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| ID | 4687996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2702243 |
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| End bp | 2703352 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639835571 |
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| Product | periplasmic lipoprotein-like protein |
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| Protein accession | YP_982787 |
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| Protein GI | 121605458 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3489] Predicted periplasmic lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.440484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00108015 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAATTTT CGCTGCCGGT GTTTTCCATT CCCTGCGCAC CCCGGATGCG GCCGGCCCTG
GTGCTGGCGG TCAGCCTGCT GGCCTGCGGA TCGGCCATGG CGCAGGCCAA CTGGGCGAAA
GTCGCCGTTC CGGCCTACAC CCCGGACAAC ATCCTGCAAG GGCTGCACCA GCACTGGACG
CGGCCACGGG CCGACGACTT CGCGCGCGAG GCGCAGGCCT TGCCGGCCGC TGTCAAGGCG
CTGTGCAATG CCAGCCCGCC AGCCGGCGAA GCGCAGTCTG CCGCGCGCAT GCAGTGGCAA
GCCACGACCC GCGCCTGGGA GCGGCTTTCG ACGGTGGCCG TCGGGCCGCT GATCACGCGC
CGCTCCCAGC GGCAAATCGA CTTTTCGCCG ACGCGCCCGG CCCTCATCGA CAAGGCCATC
CGCACCGCGC CGCAAGGGCC TGCGGCCATG GAGCGGGTCG GCACGCCGGC CAAGGGCCTG
CCGGCGCTCG AATGGCTGCT GTGGACGCAG CCGGTGGTGC CGGCCTCGGC CGCCTGCGCT
TATGCGCAAG AGGTGGCGCT GGACGTGGAG CGCGAGGCAC TGGCCTTGCA GCACGACTTC
AAGGCGCTGG CGGCAACCGA CTGGCCAAAC GCCGAGCCGG AAACGGTCAT TGCGGGAATG
GGCGAGCTGG TCAATCAATG GGTGGGCGGC CTGGAACGCC TGCGCTGGGC GCAGATGGAA
AAGCCGCTGC GCGCGGCCAA GCCCAGGGAA GCCCCCGAGT GGCCCCGCGC GGCCAGCGGC
CAGACGGCGC AAAGCTGGGC CAACCAATGG GAAGCGCTGC GCAGCCTGGG CGTGCTGACG
GGCCAGGAAG CCCCGTTGCC CGGCCAAGGG CTGGTGCCGC TGGAGACTTA CCTGCGCGGC
AAGGGACTCA ACCCGGTGGC CGACGCGCTG CTGGCCGCGA CCCGGCAAAC CGACCTGCGC
ATCCGAAACC TCGCCGCCGG CCGTGCGCCG GGTCATACGC AGGTGCTCGA TGCCGCCCGT
TCGCTGGCCA GCCTCAAGCG CGTGGCCGAG GGCAAAGTCG CGCCTGCGCT GGACATCAGC
ATGGGCTTTT CCGACGCCGA CGGAGACTAA
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| Protein sequence | MKFSLPVFSI PCAPRMRPAL VLAVSLLACG SAMAQANWAK VAVPAYTPDN ILQGLHQHWT
RPRADDFARE AQALPAAVKA LCNASPPAGE AQSAARMQWQ ATTRAWERLS TVAVGPLITR
RSQRQIDFSP TRPALIDKAI RTAPQGPAAM ERVGTPAKGL PALEWLLWTQ PVVPASAACA
YAQEVALDVE REALALQHDF KALAATDWPN AEPETVIAGM GELVNQWVGG LERLRWAQME
KPLRAAKPRE APEWPRAASG QTAQSWANQW EALRSLGVLT GQEAPLPGQG LVPLETYLRG
KGLNPVADAL LAATRQTDLR IRNLAAGRAP GHTQVLDAAR SLASLKRVAE GKVAPALDIS
MGFSDADGD
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