Gene Pnap_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2538 
Symbol 
ID4686052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2676354 
End bp2677274 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID639835546 
Productalpha/beta hydrolase fold 
Protein accessionYP_982762 
Protein GI121605433 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.257766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.634786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC CCAGCCTGAA CTACGTCACC TGTGCCGATG CAGCCGAGGG CCATCGCATG 
GCCTATTGGC AATGGGGCCA GCCCGACAGC CCGCATGTCG TGCTGTGCGT GCATGGGCTG
ACCCGCCAGG GACGCGACTT TGACGTGCTG GCGCAGGCTT TGTGCGAGCG GGCCGGGGCA
TCGTCTTCGG GCGGCATCCG CGTGGTTTGC CCCGACGTGG CGGGCCGGGG CGAAAGCGAC
TGGCTCAAGG ATCCGATGGG CTACCAGGTG CCGGCCTATG CGGCTGACAT GCTTTCGCTG
CTGGCGCACC TGCAGGCCCG CTCGCCCATC AGCACGCTGG ACTGGGTGGG CACCAGCATG
GGTGGACTGA TCGGCATGGT GGTTTGCGGC CAGCCGGGCT TGCCGCTTCC GGTGCCGGTC
CGCAAACTGG TGCTGAACGA TGTCGGTCCC ACGCTGCAGT GGCAGGCCAT TCAACGGATT
GGTGCTTACC TGGGGCAGTC CGGCCATTTC AATAGCGTGC AGGAGGCGGC CGATGCGATG
TGGAAGATTT CCGAGAGCTT TGGCCCGCAC ACGCCCGAGC AATGGCTGGC GCTGTCGCTG
CCCATGATCA AGCCGGTGTC GCCGGACGCA GGCAGCCCGC TGCGCCTGCA TTACGACCCG
GCCATTGCCG GCCCGTTCAG GTTGACCACC GAAGAAGGCG CGCAGCAGGG CGAGGCCACG
CTCTGGCAGC TTTACGATGG CATCCAGGCC GAAACGCTGG TGCTGCGCGG CGCGCAGTCC
GATTTGCTGA GCCCGCAGAC CGCCCATGCC ATGACGCAAC GCGGCCCGCG CGCCAGAGTG
GTTGAGTTTG AAGGCGTTGG CCATGCGCCG ACGCTGGTTG CGAAAGACCA GGTTGCCGCG
GTGGCCGATT TCCTGCTTTG A
 
Protein sequence
MTEPSLNYVT CADAAEGHRM AYWQWGQPDS PHVVLCVHGL TRQGRDFDVL AQALCERAGA 
SSSGGIRVVC PDVAGRGESD WLKDPMGYQV PAYAADMLSL LAHLQARSPI STLDWVGTSM
GGLIGMVVCG QPGLPLPVPV RKLVLNDVGP TLQWQAIQRI GAYLGQSGHF NSVQEAADAM
WKISESFGPH TPEQWLALSL PMIKPVSPDA GSPLRLHYDP AIAGPFRLTT EEGAQQGEAT
LWQLYDGIQA ETLVLRGAQS DLLSPQTAHA MTQRGPRARV VEFEGVGHAP TLVAKDQVAA
VADFLL