Gene Pnap_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2506 
Symbol 
ID4687850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2641600 
End bp2643099 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content57% 
IMG OID639835514 
Producthypothetical protein 
Protein accessionYP_982731 
Protein GI121605402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAC TGCAAAAGAC TGAGAACTAC CTTGTTGCCC GAGGCTGCGA CATCCACAAA 
GTCAAGGACC ATTTGGTCGA ATTTCGTCTG CCCGGTGAAA CCAGCCGAAC GCCCGGTGGC
CGACTGTCCC TGGCACGGGA CGGTACTTTG AAAATGTGGC ATCGCTACGC AGAAAAAGGA
CTTGCAGCGG GTGAGCCTTG GCTTCCCGCA GGCGACATCC CGATTGGCGA CAAATCGACT
CCGGCGCTGC GGGCGCATGT TGACCAGCTG ACCGTGCACC AAGAACTGGC GGCATTGATC
AAAGTGCCCA AATTTTCGTC TGTACCAGGG CAACTGCGCT CGTATGACCC GGAACAAGTG
TGGCGAGCGG CTGATGCGGC CTTGCAGGCG GCGGGTTTGA TTCCGTCGCG CTTGAACGGA
CGTTACTGCG ATGGCTCGGA TCAAAAACCT GTCTACAAGC TGCTGGTGTC CAACGACGGT
CTTGCAACCG CTTTTTCATT TCGTGGCGAC ATCGATCTGC CTGCACCGTG GCGGGTAGGC
AGGCAAACCA GTGATGGCAA GAAAACCATG TTTGTCACGG GACGCGATTT GGGGCTGGAT
GGCGATCTTG CACCACCCCG GTCTTCACCT GCTTTACCGC GCCCGGTGAA AACGCCTGAA
ATTCATCCGG CCGATCTGGA TCTGAATCGA GACACCATCA AGTCATGGAT GGCTGCTGAA
AACCCGCCTG CTGATCATAG GCACCTTGTC AAAGGTAATG CCACTTTGGA TGGCTCGCAG
TTGCGGGTGT ATCCCGGGCA TCATAGATAT ACCGGCACGA TGATGGTTCC CATGTTTCGC
CCTGATCCGA TGGGCAGGCG AGACACGGTG GAGGTGTGCG GTGTGCATCA CCTGATGCCC
AAGCTTACGT TCAGCACCGA CAAGATCATG GCCAAAGGCT CGCGAACGGT CGGCGCCTTT
GTGCCTTTCC CAGCTCCTGA TTCGTTGATG AGAGCAATCG TCGGCGATTC CCTGGCTCCG
ATTCAGGCAT GGCTGGCAGT CGCTGACAAA ACGAAGCCAC TCGTGATCTG TGAAGGGGTG
GCAACAGGAC TTGCGATTCA ACAGAGCGGT GCAGGCAACA CGCTTTGCGC CTTGTCGTCA
AACAATGTGA TGGAAGTCGC CAAATGGGTC AAAAATGCGG GCCTTTTCGA TTCATTTCCG
GGTGTCGTGA TCGCGACTGA CCACGACATC GGCCGTGACG CGGCGGGAAG ACTGAAATCA
AGCGCCATCC CGAGGGCGTT TGAAGCTGCC AAGGTGACGG GGTTCGCTTT GGCCGTGCCT
ACTGCGACAA GTCAAGTTGG CACTGATGCG CGGGATCTGC TCGGCGAGGG CGGTCCCCAG
GCCGTTCGTG ACTACATTGC CAGCGCTGCA CCGGCTGCCG ACGTGGAAAA AGCGAGACCC
GATATTTTTC TGTCGGCGAA CGTAAATCAG CTTTCCAAAG AACCAGAATT CGAGCGGTGA
 
Protein sequence
MDSLQKTENY LVARGCDIHK VKDHLVEFRL PGETSRTPGG RLSLARDGTL KMWHRYAEKG 
LAAGEPWLPA GDIPIGDKST PALRAHVDQL TVHQELAALI KVPKFSSVPG QLRSYDPEQV
WRAADAALQA AGLIPSRLNG RYCDGSDQKP VYKLLVSNDG LATAFSFRGD IDLPAPWRVG
RQTSDGKKTM FVTGRDLGLD GDLAPPRSSP ALPRPVKTPE IHPADLDLNR DTIKSWMAAE
NPPADHRHLV KGNATLDGSQ LRVYPGHHRY TGTMMVPMFR PDPMGRRDTV EVCGVHHLMP
KLTFSTDKIM AKGSRTVGAF VPFPAPDSLM RAIVGDSLAP IQAWLAVADK TKPLVICEGV
ATGLAIQQSG AGNTLCALSS NNVMEVAKWV KNAGLFDSFP GVVIATDHDI GRDAAGRLKS
SAIPRAFEAA KVTGFALAVP TATSQVGTDA RDLLGEGGPQ AVRDYIASAA PAADVEKARP
DIFLSANVNQ LSKEPEFER