Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2457 |
Symbol | |
ID | 4689488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2599246 |
End bp | 2599998 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639835467 |
Product | ABC transporter related |
Protein accession | YP_982684 |
Protein GI | 121605355 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTAC TGCTTCAAAC CGATACCATC ACCAAACGCT ACGGCGCTAT CCTGGTCACC GACAAGGTGT CACTGGATAT CAAGGAAGGT GAACTTCACG CCATCATTGG CCCCAATGGT GCTGGCAAGA CCACGCTGAT CAACCAGCTG TCGGGTGAGC TGCGCTCGGA CAGTGGGCGC ATCCGCTTTG GCAATGCAGA TGTGACTGAC TTGGGGATCA ATGCGCGCGC TCGCATGGGG CTGGTGCGGT CTTACCAGAT CACCTCGGTG TTCGACGAAT TCACGGTATT GGAAAACGCG ACGCTGGCAG CGCTGGGTGC GCGCACCCAT GCGTTCAAAT TTTGGCGATC TTTGCTCGGT GACCGTGAGG CCTTGGCGGC GGCTCGGGAA GGGATAGAGG CCGCTGGGCT CAACACGCGC ACTGATGCGC CGGCATCGGA GTTGGGATAC GGTGAACGCC GCCAGCTGGA GTTGGCCATG GCACTTGCGG CGCGGCCAAA ATTTTTGCTG CTGGACGAGC CGATGGCTGG CATGAGTGTG CAGGAGTCGG GTGCGGTGGT GGCGTTGCTC AAGTCGCTCA AGCGCAAGTA CACGATATTG CTGGTCGAAC ATGACATGAA CGCGGTGTTC GCCCTGGCAG ACCGCATCAG CGTGCTGGTT TACGGTCGCC TCATGGTGAC CGGAACACCT GAGGAAATTC GTGGCAATGC GGAAGTGCGT GCCATCTACC TTGGTGAAGA GGAGATCGCT TGA
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Protein sequence | MKVLLQTDTI TKRYGAILVT DKVSLDIKEG ELHAIIGPNG AGKTTLINQL SGELRSDSGR IRFGNADVTD LGINARARMG LVRSYQITSV FDEFTVLENA TLAALGARTH AFKFWRSLLG DREALAAARE GIEAAGLNTR TDAPASELGY GERRQLELAM ALAARPKFLL LDEPMAGMSV QESGAVVALL KSLKRKYTIL LVEHDMNAVF ALADRISVLV YGRLMVTGTP EEIRGNAEVR AIYLGEEEIA
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