Gene Pnap_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2457 
Symbol 
ID4689488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2599246 
End bp2599998 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content59% 
IMG OID639835467 
ProductABC transporter related 
Protein accessionYP_982684 
Protein GI121605355 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAC TGCTTCAAAC CGATACCATC ACCAAACGCT ACGGCGCTAT CCTGGTCACC 
GACAAGGTGT CACTGGATAT CAAGGAAGGT GAACTTCACG CCATCATTGG CCCCAATGGT
GCTGGCAAGA CCACGCTGAT CAACCAGCTG TCGGGTGAGC TGCGCTCGGA CAGTGGGCGC
ATCCGCTTTG GCAATGCAGA TGTGACTGAC TTGGGGATCA ATGCGCGCGC TCGCATGGGG
CTGGTGCGGT CTTACCAGAT CACCTCGGTG TTCGACGAAT TCACGGTATT GGAAAACGCG
ACGCTGGCAG CGCTGGGTGC GCGCACCCAT GCGTTCAAAT TTTGGCGATC TTTGCTCGGT
GACCGTGAGG CCTTGGCGGC GGCTCGGGAA GGGATAGAGG CCGCTGGGCT CAACACGCGC
ACTGATGCGC CGGCATCGGA GTTGGGATAC GGTGAACGCC GCCAGCTGGA GTTGGCCATG
GCACTTGCGG CGCGGCCAAA ATTTTTGCTG CTGGACGAGC CGATGGCTGG CATGAGTGTG
CAGGAGTCGG GTGCGGTGGT GGCGTTGCTC AAGTCGCTCA AGCGCAAGTA CACGATATTG
CTGGTCGAAC ATGACATGAA CGCGGTGTTC GCCCTGGCAG ACCGCATCAG CGTGCTGGTT
TACGGTCGCC TCATGGTGAC CGGAACACCT GAGGAAATTC GTGGCAATGC GGAAGTGCGT
GCCATCTACC TTGGTGAAGA GGAGATCGCT TGA
 
Protein sequence
MKVLLQTDTI TKRYGAILVT DKVSLDIKEG ELHAIIGPNG AGKTTLINQL SGELRSDSGR 
IRFGNADVTD LGINARARMG LVRSYQITSV FDEFTVLENA TLAALGARTH AFKFWRSLLG
DREALAAARE GIEAAGLNTR TDAPASELGY GERRQLELAM ALAARPKFLL LDEPMAGMSV
QESGAVVALL KSLKRKYTIL LVEHDMNAVF ALADRISVLV YGRLMVTGTP EEIRGNAEVR
AIYLGEEEIA