Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2400 |
Symbol | |
ID | 4686867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2532550 |
End bp | 2533371 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639835410 |
Product | hypothetical protein |
Protein accession | YP_982628 |
Protein GI | 121605299 |
COG category | [S] Function unknown |
COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.238521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.776815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAATC GCACCGTGTT TTTCATCTCC GACGGCACCG GCATTACCGC CGAAACCTTT GGCAACGCCA TCTTGGCCCA GTTCGAAATC AGTCCGCGCC ATGTCCGCCT GCCTTTCATA GACACCGTGG ACAAGGCCCA TCAGGCGATC CGCCATATCA ATCACACCGG GGAACTGGAA GGCAAGCGGC CCATCGTTTT CACCACGCTG GTGAACATGG ACATCCTGGC GGTCCTCAAG GCCCAGTGCA ACGGCATGCT GCTGGACATG TTTGGCATAT TCGTGGCCCC GCTGGAAAGC GAACTGGGAA TCAAATCCAA CCACCGGGTG GGCCGGTTTT CGGATGCCTC CAAAAGCAAA GCCTACGACG AGCGGATCGA GGCCATCAAT TTCTCGCTGG CGCACGATGA CGGCCAGAGC CATCGGGATC TGGCGGGCTC GGACGTGATC CTGGTCGGCG TCAGCCGCAG CGGAAAAACG CCCACCACGC TGTACCTGGC GATGCAGTAC GGCCTGAAGG CGTCCAATTA CCCCTTGATC CCCGAAGACT TCGAGCGCCG GCAACTGCCG CCAGCGCTGG TGCCGCACCG CAAGAAGATC TTTGGCCTGA CGATTGCCCC GGAGCGGCTG AGCCAGATCC GCAACGAGCG CCGGCCCAAT TCGACCTATT CCAGCCTGGC CAACTGCCGC AATGAGATTC ATGAAGCCGA GGCCATGATG CGCCGCGAAG GCATTCGCTG GCTCTCGACC ACCACCAAGT CCATCGAGGA AATTGCCACC ACGATCCTGC AGGAAATCAG GCCAGAGCGG CTGGAATACT GA
|
Protein sequence | MSNRTVFFIS DGTGITAETF GNAILAQFEI SPRHVRLPFI DTVDKAHQAI RHINHTGELE GKRPIVFTTL VNMDILAVLK AQCNGMLLDM FGIFVAPLES ELGIKSNHRV GRFSDASKSK AYDERIEAIN FSLAHDDGQS HRDLAGSDVI LVGVSRSGKT PTTLYLAMQY GLKASNYPLI PEDFERRQLP PALVPHRKKI FGLTIAPERL SQIRNERRPN STYSSLANCR NEIHEAEAMM RREGIRWLST TTKSIEEIAT TILQEIRPER LEY
|
| |