Gene Pnap_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2400 
Symbol 
ID4686867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2532550 
End bp2533371 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content60% 
IMG OID639835410 
Producthypothetical protein 
Protein accessionYP_982628 
Protein GI121605299 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.238521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.776815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATC GCACCGTGTT TTTCATCTCC GACGGCACCG GCATTACCGC CGAAACCTTT 
GGCAACGCCA TCTTGGCCCA GTTCGAAATC AGTCCGCGCC ATGTCCGCCT GCCTTTCATA
GACACCGTGG ACAAGGCCCA TCAGGCGATC CGCCATATCA ATCACACCGG GGAACTGGAA
GGCAAGCGGC CCATCGTTTT CACCACGCTG GTGAACATGG ACATCCTGGC GGTCCTCAAG
GCCCAGTGCA ACGGCATGCT GCTGGACATG TTTGGCATAT TCGTGGCCCC GCTGGAAAGC
GAACTGGGAA TCAAATCCAA CCACCGGGTG GGCCGGTTTT CGGATGCCTC CAAAAGCAAA
GCCTACGACG AGCGGATCGA GGCCATCAAT TTCTCGCTGG CGCACGATGA CGGCCAGAGC
CATCGGGATC TGGCGGGCTC GGACGTGATC CTGGTCGGCG TCAGCCGCAG CGGAAAAACG
CCCACCACGC TGTACCTGGC GATGCAGTAC GGCCTGAAGG CGTCCAATTA CCCCTTGATC
CCCGAAGACT TCGAGCGCCG GCAACTGCCG CCAGCGCTGG TGCCGCACCG CAAGAAGATC
TTTGGCCTGA CGATTGCCCC GGAGCGGCTG AGCCAGATCC GCAACGAGCG CCGGCCCAAT
TCGACCTATT CCAGCCTGGC CAACTGCCGC AATGAGATTC ATGAAGCCGA GGCCATGATG
CGCCGCGAAG GCATTCGCTG GCTCTCGACC ACCACCAAGT CCATCGAGGA AATTGCCACC
ACGATCCTGC AGGAAATCAG GCCAGAGCGG CTGGAATACT GA
 
Protein sequence
MSNRTVFFIS DGTGITAETF GNAILAQFEI SPRHVRLPFI DTVDKAHQAI RHINHTGELE 
GKRPIVFTTL VNMDILAVLK AQCNGMLLDM FGIFVAPLES ELGIKSNHRV GRFSDASKSK
AYDERIEAIN FSLAHDDGQS HRDLAGSDVI LVGVSRSGKT PTTLYLAMQY GLKASNYPLI
PEDFERRQLP PALVPHRKKI FGLTIAPERL SQIRNERRPN STYSSLANCR NEIHEAEAMM
RREGIRWLST TTKSIEEIAT TILQEIRPER LEY