| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2398 |
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| Symbol | |
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| ID | 4686256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2528931 |
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| End bp | 2529794 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639835408 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_982626 |
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| Protein GI | 121605297 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTC GGTTTGATGA CAGGCGCAAC CCGCAATGCC AACCCGTTTT ATGCGTTGCT
GCAACTTCTG GGGCGGCCCT GGATCCGTGC GATTCGCTGG CTTTCTCCTC GCGTGGTGCT
GGATCGGCAT GTACCGCTGG TTGCATTTTT TCTCCTGCTG CTTGTCTGGG GTGCAGCGAG
TTTGGCCAAA GTCAGCATCT GCCTGCAAAT CGGCGTTGCC TTGTGCAAAT GATCTGTTCT
CTCAAGCGTC GTTTTGATTA CCTTTTTTCA AAGGCGCAAG CGCTGATCTT GCTGGCGTTC
GGACAGCGGG AACAAGCCCT GTCCCGGTTT GACCGCATGC TGGTGCTTTT GCCCATGGAC
CGTTATGCAC TTGCCAGCCG TGCCCATGTG CTGGTCCAGC TCAACAGGCT GGATGACTCC
ATTGCCAACT TGCAGCAACT CAGCCGCGTC ACGGGTACGC CAGTGCAGCA GGCTGCGGCC
TGCTTCAACC TGGGTTATGT ATTGCAGCAG AACGGACGGC ATGATGAAGC CCGCCCTGCA
TTTGAAAAAG CCACCGAACA CCAGCCTTGC ATGGACCGGG CGTGGTACGG TCTTGCGCTG
GTGCTGATCC GTCAGCGGCA GTTTCATGAG GCAAGGCTGG CGCTGCAAAA AACTACACGG
CTGCAACCCA TGAGTCCCTA TGGCTGGTAT CGGTTGGCAG AGGTCAATCT GGCGCTGAGT
GAACCCGAAA AAGCGCGCCA GGTGATTGAT CACCTGCGCC AGTTCGAACC CAAGGTGGCC
GCGCAACTTG AGCGCGACAT CGGCCTGTCT GTCCATTTGC AAGTTAATAA CCGGCATGTC
CCGACGCGTG ATGTTGCCTG CTGA
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| Protein sequence | MAARFDDRRN PQCQPVLCVA ATSGAALDPC DSLAFSSRGA GSACTAGCIF SPAACLGCSE
FGQSQHLPAN RRCLVQMICS LKRRFDYLFS KAQALILLAF GQREQALSRF DRMLVLLPMD
RYALASRAHV LVQLNRLDDS IANLQQLSRV TGTPVQQAAA CFNLGYVLQQ NGRHDEARPA
FEKATEHQPC MDRAWYGLAL VLIRQRQFHE ARLALQKTTR LQPMSPYGWY RLAEVNLALS
EPEKARQVID HLRQFEPKVA AQLERDIGLS VHLQVNNRHV PTRDVAC
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