| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2290 |
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| Symbol | |
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| ID | 4687692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2430965 |
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| End bp | 2432182 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639835301 |
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| Product | cysteine desulfurase IscS |
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| Protein accession | YP_982519 |
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| Protein GI | 121605190 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00326388 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCC CACACTTCCC GATTTACATG GACTACAGCG CTACCAATCC TTGCGACCCG
CGGGTGGTGG ACGCGATGAT TCCGTGGTTG CGCGAGCATT TCGGCAATCC CGCATCCCGT
AGCCATGCCT GGGGCTGGGA AGCCGAAGCT GCGGTTGAAA AAGCGCGTGA GCAGGTGGCC
GCGTTGATTG GCGCCGACCC GCGCGAAATT GTCTGGACCA GCGGCGCCAC CGAGTCGAAC
AACCTCGCAC TCAAGGGTGC AGCCCATTTC TACAAGTCCA AAGGCAAGCA CCTCATCACC
GTCAAGACCG AGCACAAAGC GGTGCTCGAT ACCTGCCGGG AGCTGGAGCG TCAGGGTTTC
GAAGTCACTT ACCTGGATGT GCAAACCGAT GGTTTGCTGG ATCTGGAAGT GCTCAAGGCG
GCGATTCGGC CTGACACGAT TCTGGTCAGC GTCATGTTCG TCAACAATGA AATCGGCGTG
ATTCAGGACA TTCCTGCCAT TGGCGCCCTG TGCCGCGAAA AGGGCATCAT TTTTCATACC
GATGCCGCGC AGGCAACCGG ACGGGTCGAT ATCGACCTGC AGACGCTGCC GGTCGATTTG
ATGAGCCTGA CCTCGCACAA AACCTACGGC CCCAAAGGCA TTGGGGCTTT GTATGTGCGC
CGCAAACCGC GCGTTCGGCT CGAAGCGCAA ATGCACGGCG GTGGTCATGA GCGCGGCATG
CGTTCAGGCA CGCTGCCGAC GCACCAGATC GTCGGCATGG GCGAGGCTTA CCGCATTGCC
AAAGCCGAGA TGCATGAAGA AAACAAGCGC ATCCGCGCTT TGCATGAGCG CATGCTGAAC
GGCCTGAAGG ACGTCGAGGA AGTCTTCCTC AATGGCGATG CCGAAAAACG CGTGCCGCAC
AACCTGAACA TGAGCTTCAA TTTCGTTGAA GGCGAATCCC TGATCATGGG TATCAAGGGC
CTTGCCGTGT CGAGTGGTTC GGCCTGCACG TCGGCCAGCC TGGAGCCCAG CTATGTGTTG
CGCGCCCTGG GTCGCAGCGA TGAACTGGCC CATAGCAGCC TGCGCATGAC GATAGGCCGC
TGGACGACCG AGGAAGAAAT CGACTATGCC GTTGCCACCA TCAAGGAAAA TGTGGCCAAG
CTGCGCGATC TTTCCCCATT GTGGGAAATG TTCAAGGATG GTGTTGACCT GTCCACCATC
CAGTGGGCGG CGCATTAA
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| Protein sequence | METPHFPIYM DYSATNPCDP RVVDAMIPWL REHFGNPASR SHAWGWEAEA AVEKAREQVA
ALIGADPREI VWTSGATESN NLALKGAAHF YKSKGKHLIT VKTEHKAVLD TCRELERQGF
EVTYLDVQTD GLLDLEVLKA AIRPDTILVS VMFVNNEIGV IQDIPAIGAL CREKGIIFHT
DAAQATGRVD IDLQTLPVDL MSLTSHKTYG PKGIGALYVR RKPRVRLEAQ MHGGGHERGM
RSGTLPTHQI VGMGEAYRIA KAEMHEENKR IRALHERMLN GLKDVEEVFL NGDAEKRVPH
NLNMSFNFVE GESLIMGIKG LAVSSGSACT SASLEPSYVL RALGRSDELA HSSLRMTIGR
WTTEEEIDYA VATIKENVAK LRDLSPLWEM FKDGVDLSTI QWAAH
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