Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2179 |
Symbol | |
ID | 4687073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2320099 |
End bp | 2320836 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639835189 |
Product | hypothetical protein |
Protein accession | YP_982408 |
Protein GI | 121605079 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTCAAC TACCAAGGAG AGCATTCATG ATGACGAAGA GCATTCAATC CCTGCTTGCC GCAGCGGCGA TTCTCGGGGC TTGCGCGGCG GGCGCGCAGG ATAGGGACAA GGCCGCGAGT CCGGCGTGGC AGGACCAGTT CGGCATCTCG AACTGCACCA TCGTGACGCA GGGCAGAAAT CAATACACCG TGCTGGAGCC GGGCTTTCAG CTGGTCCTCG AAGGCGGCGA TACCCGGCTC CAGATCACGG TCCTTGATGA GACCAAGGTG GTCGATGGGG TCACTACCCG CGTGGTCGAG GAAAAAGAAT GGAAGAACGG TGAACTCTAC GAAGTCGCCC GGAATTACTT CGCCATGTGC GAGCAAACCA GGGACGTGTT CTATTTCGGC GAAGACGTCG ATTTTTACAA GAACGGCAAG GTGACCAAGC ACGACGGCAC CTGGCATGCT GGCGTGAATG GCAACCGGGC CGGTCTGCAG ATGGCCGGGG CGCCACAACT GAAGATGAAG TACTACCAGG AGATCGCGCC CGGCGTGGCC ATGGACCGGG CCGAGATCGT GAGCCTGAAC GAGACCTGCA AAACCCCGGC AGGGACGTTC TCCAACTGCC TGAAGGTCAA GGAAGGCTCG GCCATCGATA TCACCGCGCG CGAGTACAAG TATTACGCGC CGTCGATAGG GCTCGTCAGG GACGAGGACT TGCGCCTGAC GAAGTACGGT TTCATCAACG GCAAATAG
|
Protein sequence | MGQLPRRAFM MTKSIQSLLA AAAILGACAA GAQDRDKAAS PAWQDQFGIS NCTIVTQGRN QYTVLEPGFQ LVLEGGDTRL QITVLDETKV VDGVTTRVVE EKEWKNGELY EVARNYFAMC EQTRDVFYFG EDVDFYKNGK VTKHDGTWHA GVNGNRAGLQ MAGAPQLKMK YYQEIAPGVA MDRAEIVSLN ETCKTPAGTF SNCLKVKEGS AIDITAREYK YYAPSIGLVR DEDLRLTKYG FINGK
|
| |