Gene Pnap_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2128 
Symbol 
ID4688258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2266235 
End bp2267014 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID639835139 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_982358 
Protein GI121605029 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00663938 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAGAAC TACACCCCAT CCTGACGGAA GTCCGTGGCC GGGTTGGCGT GATCACGCTG 
AACCGGCCCG GGCAGCTCAA TGCCCTGAAC GATGCGCTCA TGGATGCGCT GGGCGACGCC
CTGCTGGCGT TCGACCGCGA CGACGCGATT GGCGCTATCG TCATCACCGG CAGTCCCAAG
GCCTTTGCCG CCGGCGCGGA CATCGCCGCC ATGGCCGACT GGAGCTACAT GGACGTGTAC
CAGGGCGACT TCATCACCCG CAACTGGGAA ACCATACGCC GGGTGCGCAA GCCGGTGATT
GCCGCCGTGG CCGGTTTTGC CATGGGCGGC GGCTGCGAGC TGGCGCTGGC CTGCGACCTG
ATCATCGCCG GCGAATCGGC CAGGTTCGCG CTGCCCGAGA TCAAGCTGGC GATGCTGCCC
GGCGCCGGCG GCACGCAGCG CCTGCCGCGC GCCATCGGCA AGGCCAAGGC CATGGACATG
TGCCTGTCGG CCCGCATGCT GGGCGCCGAT GAAGCCGACC GCTACGGCCT GGTCTCGCGC
GTCGTGCCCG ATGAGCAGCT GCTGGAACAG ACTTTGGCCC TGGCCGCGAA GATCGCCAGC
TACTCCCTGC CCGCGCTGAT GGCGATCAAG GAGTCGGTCA ATCGCAGTTG GGAAAGCTCG
CTGACCGAAG GCATCCTGTA TGAACGCCGC GAGCTGCATG CGCGCTTTGC CAGCCAGGAC
GCCCACGAAG GCATGCACGC CTTTCTATCC AAACGCACTC CGGTGTTCGA ACACCGTTGA
 
Protein sequence
MKELHPILTE VRGRVGVITL NRPGQLNALN DALMDALGDA LLAFDRDDAI GAIVITGSPK 
AFAAGADIAA MADWSYMDVY QGDFITRNWE TIRRVRKPVI AAVAGFAMGG GCELALACDL
IIAGESARFA LPEIKLAMLP GAGGTQRLPR AIGKAKAMDM CLSARMLGAD EADRYGLVSR
VVPDEQLLEQ TLALAAKIAS YSLPALMAIK ESVNRSWESS LTEGILYERR ELHARFASQD
AHEGMHAFLS KRTPVFEHR