Gene Pnap_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2030 
Symbol 
ID4689634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2157237 
End bp2158235 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content65% 
IMG OID639835039 
Producthypothetical protein 
Protein accessionYP_982260 
Protein GI121604931 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.608213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.556518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG CTGCTTTTTC CCGTCGCACC CTGCTGACCT CCGCCGCGCT GGCGGCCACC 
GTGGCGGGCG CCTGCCTGCC GGTCCACGCC CAGGAGTGGC CCACCAAGAG CGTGCGCCTG
ATCACGCCTT ACCCCGTGGG CGGTGGCCCC GATGGCATCG CCCGCCTGCT CGCTGACAAG
CTGTCCAAGA AATGGGGCAA GCCGGTGGTG GTGGACAACC GTCCGGGCGG CAACGGCTTC
ATCGCCATCG ACGCCTTCAA GCGTGGCGCG AGCGATGGCC ACGACCTGCT GCAGCTCGAC
AGCGTGCACC TGACGGCCTA CCCGTACATG TTCAAGAAGC TGCCCTACGA CGTGAGCAAG
GACTTCGAGC CCATCGCGCC GCTGTTCCAG TCCTTCCTGT TCTTTGTCGT GCCCACCAAC
AGCAAGTACA CCAAGGTGTC CGAGCTGATC GCCGACGCCA AGGCCCGGCC CGGCAAGATC
AACTACGGTT CCTGGTCCAT CGGCAACCCG GTGCACCTGG GCGTGGAGGA GCTGCAGGAG
CTGGCTGGCA TCAAGGTCCA GCATGTGATC TACAAGGAAA CCACTCAGCT CTACACCTCG
GTGGGCACCG GCGAGCTGGA CTTCTCCATC GGCTCGGCCG GCACCGCCGG CGCGATGTAC
CGCGCCGGCA AACTGCGTTT CCTGGCCGTG GCCGGCCCCA AGCGCATGGA AGCCTACCCG
GACGTGCCCA CCGTGGCCGA GTCCGGCGGG CCTGCCAACG GCTACGAGGT CAGCGGCTGG
AACACCATCG CCGGCCCCAA GGGCCTGTCG CCCGCCATCC AGGACAAGAT CCGCAAGGAC
ATCGCCGAGG CCCTGTCCGG ACCCGACGTC AAGGAAAAAT TCCTGACCTT CGGCTATGTG
CCTCTGAACC TGGACCGTCC GCAGTTCGCC AAGTTCATCC AGAACGAAGC CAGCCGCTAT
TCGGCCGTCA TCAAGCGCGC CAAGATCGAA CTGGAATAA
 
Protein sequence
MNLAAFSRRT LLTSAALAAT VAGACLPVHA QEWPTKSVRL ITPYPVGGGP DGIARLLADK 
LSKKWGKPVV VDNRPGGNGF IAIDAFKRGA SDGHDLLQLD SVHLTAYPYM FKKLPYDVSK
DFEPIAPLFQ SFLFFVVPTN SKYTKVSELI ADAKARPGKI NYGSWSIGNP VHLGVEELQE
LAGIKVQHVI YKETTQLYTS VGTGELDFSI GSAGTAGAMY RAGKLRFLAV AGPKRMEAYP
DVPTVAESGG PANGYEVSGW NTIAGPKGLS PAIQDKIRKD IAEALSGPDV KEKFLTFGYV
PLNLDRPQFA KFIQNEASRY SAVIKRAKIE LE