| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2015 |
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| Symbol | |
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| ID | 4689394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2142066 |
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| End bp | 2143121 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639835023 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_982245 |
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| Protein GI | 121604916 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.263869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.632538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTG GTTCTTCACC CGTGTCGCCG CCTTCGGTCT CGCCTTCGCG TCGCGCCTGG
CAGCGCTTTC GGCGCAACCG GCTCGGTTAC TGGAGCCTGG TGCTGTTTTG CCTGCTGGTC
GTGTTCAGCC TGTTTGCCGA ACTGCTGTCG AACGACAAGC CGCTGGTGGT GAGCTACCAC
GGCAAGCTGT ACTTTCCGCT CGTCAAGGAC TATTCGGAAA AAACCTTCGA TGGCGACTTC
GACACGCCTG CCGACTACCT CGACCCGTTC ATCCAGGGCA AGCTGACGCA GGGCGGCAAC
TGGGCGATCT ACCCACCCAA TCCCTATGGG CCGCGCACCA TCAACTATTT CGCCAAGGAC
CCGAATCCTT CGGCGCCGTC GCGTGGCAAC CTGTTCGGCA CCGATGACCG GGGGCGCGAC
CTGCTGGCGC AGCTGATCTA CGGCTTTCGG CTCAGTGTGC TGTTTGGCCT GGCGCTGACC
TTCATCGGCG TGGTGATGGG CGTGATTGCC GGCGCCATCC AGGGTTATGC GGGCGGCAAG
ACCGACCTGA TCGGCCAGCG CTTCATGGAA ATCTGGGGCT CCATGCCCGA GCTCTACCTG
TTGATCATTT TCAGCGCCAT CTTTGCGCCC AGCGTGGCGC TGCTGCTGGT GCTGCTCAGC
CTGTTTGGCT GGATGGGGCT GTCGGATTAT GTGCGCGCCG AGTTCTTGCG CAACCGCCAG
ATGGACTACG TGCGGGCCGC CAAGGCCCTG GGTGTCAGCA ATTTGCAGAT CATGTGGCGG
CACATCCTGC CCAACAGCCT CACGCCGGTG GTGACGTTTT TGCCGTTTCG CATGAGCGCG
GCCATCCTGG CGCTGACCTC GCTGGATTTC CTGGGGCTGG GCGTGCCGCC GGGAACGCCT
TCGCTGGGCG AGCTGCTGAG TCAGGGCAAG GCCAATATCG ACGCCTGGTG GATTTCGCTG
TCCACGTTTG CCGTGCTCGT CATTACTTTG CTGCTGCTGA CCTTCATGGG CGACGCCCTG
CGCGATGCGC TGGATCCGCG AAAGATGGAC CAATGA
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| Protein sequence | METGSSPVSP PSVSPSRRAW QRFRRNRLGY WSLVLFCLLV VFSLFAELLS NDKPLVVSYH
GKLYFPLVKD YSEKTFDGDF DTPADYLDPF IQGKLTQGGN WAIYPPNPYG PRTINYFAKD
PNPSAPSRGN LFGTDDRGRD LLAQLIYGFR LSVLFGLALT FIGVVMGVIA GAIQGYAGGK
TDLIGQRFME IWGSMPELYL LIIFSAIFAP SVALLLVLLS LFGWMGLSDY VRAEFLRNRQ
MDYVRAAKAL GVSNLQIMWR HILPNSLTPV VTFLPFRMSA AILALTSLDF LGLGVPPGTP
SLGELLSQGK ANIDAWWISL STFAVLVITL LLLTFMGDAL RDALDPRKMD Q
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