Gene Pnap_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2003 
Symbol 
ID4688819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2128109 
End bp2128474 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content59% 
IMG OID639835011 
Producthypothetical protein 
Protein accessionYP_982233 
Protein GI121604904 
COG category[S] Function unknown 
COG ID[COG2914] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.176741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.719694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAAC CTGAAAACCT CCCAGATGGC CTGAGCCTGA AGATCACGCT GGTTTATTCA 
CCCGCTCCGC GCCAGGTTCG CGAATGGGCG CTGGAGCTTG CGACGGGTGC AACCGTGGGA
CAAGCACTTG GCTGCAGCAG CCTCTTCGAG GAGTTTGCGG AACTGCGCAA AGACCGCTTG
CTGGTCGGTA TCTGGGGCCG GAAAACCCGG CTCGACCATC CACTGGATGA CAACGACCGG
ATAGAAATTT ACCGCACTCT GCGGGTCGAT CCCAAAGTGG CCAGGCGCGA GCGCTTTAAC
CATCAGGGTG CCAAAAGCGC AGGGCTGTTC ACGAAAAAAC GGCCCGGGGC AAAAGCCGGC
TATTGA
 
Protein sequence
MVKPENLPDG LSLKITLVYS PAPRQVREWA LELATGATVG QALGCSSLFE EFAELRKDRL 
LVGIWGRKTR LDHPLDDNDR IEIYRTLRVD PKVARRERFN HQGAKSAGLF TKKRPGAKAG
Y