Gene Pnap_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1990 
Symbol 
ID4688217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2113858 
End bp2114871 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content54% 
IMG OID639834998 
Producthypothetical protein 
Protein accessionYP_982220 
Protein GI121604891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0562007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTGA AAAGTAAAAG TACCAAAGGT GTTCAGCAAG AAGATGTCTG GACAGCCGCA 
GACAGCCTGA TTGCCGATGG GCTCAGGCCA ACGATTGAGC GGGTACGCCA AAAAATCGGC
CGAGGCTCCC CAAATACCGT CAGCCCGATG CTCGAAACCT GGTTTTCCAC CCTGGCAGCA
CGCCTTGGCG TCAATGCCTT GCAGGATGAG GCTGCTGGTG TCCCGAAAGC CTTGCAACAA
GCCATGGCAA ATTTATGGGA GATGGCTTTG TCAAACGGTC GAGAAGAAGC TGAACTGCAG
ATAGCACAAG CTCGGGCTGA CTTGGCCCAG GCAAAAGATG CCTTGCAGGT ACGTGAAAGC
GAGCTGGTGC AGCAGGAACG GGTGCGCGCA GCAAAACACC AAGCGCTTGA AGAGATGCTG
CGTGCTGCCG AAAACAAGGC CGAAGAGGCC TTGGAACGGC TCAGTCAGGC GCAAGCCTTG
ACAAGCAGGC GCGAAGTGGA AATTGAAGGC CTTCGCGGCA GGATCAATGT CATTGAGAGT
GAACGTGATT CAGAAAGACG CCGCATCGAT GAAGATACAG TCCGCTATGC CAAGGAGCGG
CAAAGGCATG AGGAACGCGC CCAGGCAACG CAGCACAAGT TGCTTGAAGA AATTGACAGG
GCCCGTCAGG AAGCGAAAAA GATTCATGGC GATGCGCAAA TATCGGAAAA GCGCTTCGAG
GCACAGCACA GTCTTTTACA GCAAAAACTT CGATTGCACG AGACTGATCT GGCCAAAGCC
CAGGAATTGC GTTCCGCGCA ATCGGCTGAC CTTCATGCAT TGCGCGAAGC ACTTGCCGTG
TCCAATTCCC ATTCAGACGA ACTTCGCAAT CTGTTGGAAA AGCAGCAAAG CGGCAGTGAA
AACACCATTG CGCGCTTGAC CGAGGCTTTG TCAACGCATA AGGGGAAACA GCAAGCAGGG
CGTAAACCCC TGATGCGAAA GATCAAAAAG CCTCTGGGTA TCCGCCAGCG TTAA
 
Protein sequence
MQLKSKSTKG VQQEDVWTAA DSLIADGLRP TIERVRQKIG RGSPNTVSPM LETWFSTLAA 
RLGVNALQDE AAGVPKALQQ AMANLWEMAL SNGREEAELQ IAQARADLAQ AKDALQVRES
ELVQQERVRA AKHQALEEML RAAENKAEEA LERLSQAQAL TSRREVEIEG LRGRINVIES
ERDSERRRID EDTVRYAKER QRHEERAQAT QHKLLEEIDR ARQEAKKIHG DAQISEKRFE
AQHSLLQQKL RLHETDLAKA QELRSAQSAD LHALREALAV SNSHSDELRN LLEKQQSGSE
NTIARLTEAL STHKGKQQAG RKPLMRKIKK PLGIRQR