Gene Pnap_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1943 
Symbol 
ID4686176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2065635 
End bp2066771 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content67% 
IMG OID639834952 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_982174 
Protein GI121604845 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.612033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCA TTTACTACGT CACCCAGGTC CAGTTCGAAT TCGGCGCCAT CCAGTTGCTC 
AGCCAGGAAT GCAAGCGCGT CGGCATCACC CGGCCTCTCA TCGTGACCGA CCCGGGCGTG
AAGGCCGCAG GCATTTTGCA AAAGGCGCTG GACGCCCTGC CCGGCATGAC GGTCGCGGTG
TTTGACCAGA CGCCGTCCAA CCCGACCGAA GCGGCGGTGC TTGCTGCGGC AGAACTCTAC
AAGACCAGCG GCTGCGACGG GCTGATTGCT GTGGGCGGCG GCTCGGCGAT TGACTGCGCC
AAGGGCGTGG CGATTGCGGC GACGCACGAA GGCCCGTTCA CCCGCTACGC CACCATCGAA
GGCGGCTCGC CAAAAATCAC CGGGCGCGCC GCCCCGCTGA TTGCCGTTCC CACCACCAGC
GGCACCGGCA GCGAAGTCGC GCGCGGCGCG ATCATCATCG TGGGCGACCA CCGCAAGCTC
GGCTTTCATT CCTGGCACCT GGTGCCGAAA ACGGCGATTT GCGACCCCGA ACTGACGCTG
GGCCTGCCCG CGCGCCTGAC CGCCGCCACC GGCATGGACG CGATTGCGCA TTGCATGGAA
ACCTTCATGT CCGCCGCCTT CAACCCGCCG GCCGATGGCA TCGCGCTCGA CGGCCTGGAG
CGCGGCTGGG CGCACATCGA GCACGCCACG CGCGATGGCG GCGACCGCGA AGCGCGGCTG
AACATGATGA GCGCCTCGAT GCAGGGCGCC ATGGCCTTCC AGAAAGGCCT GGGCTGCGTG
CATTCGCTGA GCCACAGCCT GGGCGGGGTT GATCCGCGCC TGCACCATGG CGCGCTGAAC
GCCGTGTTTT TGCCGGCCGT GGTGCGCTTC AACGCCGGGG CCGAATCGGT GCAGAAAGAG
CATCGGCTGG CGCGCATGGC CCGCGTCATG GGCCTGTCGT CAGGCAGCGA GATTCCCGAC
GCCATCAAGG CCATGAACGC CCGCCTCGGC CTGGCCCCGG GCTTGGCGGC GATGGGTGTG
CAGCCGGGCC AGTTCAGCCA GATCATCGAA GGCGCGCTGG CCGACCATTG CCACCAGACC
AATCCACGCC TGGCCAGCGT GCAGGACTAC GAGGCCATGC TGAAAGATTC GATGTGA
 
Protein sequence
MAFIYYVTQV QFEFGAIQLL SQECKRVGIT RPLIVTDPGV KAAGILQKAL DALPGMTVAV 
FDQTPSNPTE AAVLAAAELY KTSGCDGLIA VGGGSAIDCA KGVAIAATHE GPFTRYATIE
GGSPKITGRA APLIAVPTTS GTGSEVARGA IIIVGDHRKL GFHSWHLVPK TAICDPELTL
GLPARLTAAT GMDAIAHCME TFMSAAFNPP ADGIALDGLE RGWAHIEHAT RDGGDREARL
NMMSASMQGA MAFQKGLGCV HSLSHSLGGV DPRLHHGALN AVFLPAVVRF NAGAESVQKE
HRLARMARVM GLSSGSEIPD AIKAMNARLG LAPGLAAMGV QPGQFSQIIE GALADHCHQT
NPRLASVQDY EAMLKDSM