| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1902 |
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| Symbol | |
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| ID | 4689058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2025605 |
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| End bp | 2026426 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834909 |
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| Product | beta-ketoadipate pathway transcription regulator |
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| Protein accession | YP_982133 |
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| Protein GI | 121604804 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.924992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.294283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTTT CCAGAACCGT TTCCGCCGAC CGCGTCTTTC CCATTGCCAA GGCCGACAAG
ATCGAGGGCA TGGCCAAGGG CATGGCGGTG CTGGAGAGTT TTGACACCCA GCGCCAGCGC
CTCAATGCCA CGCTGGCGGC TGAGCGGGCG GGGCTGACCC GGGCTGCGGC GCGCCGCCAT
TTGCTGACGC TGACGCACCT GGGCTACCTC GAAACCGATG GCAGTTACTT CTGGCTGTCA
GCCAAGGTGC TGCGGTTTTC AGGAAGCTAC CTGGCGTCCG CGCGTTTGCC GCGAGCCATC
CAGCCCACCT TGAATCGCCT GGCGGCGCAG ACCCGGCAGT CGTTTTCAGT CGCCGTGCTG
GACTTTGACG AGGTGGTGAT CGTCGGGCGC AGCGGCTACG AATGGACCAA GTCGCCCGAA
GGCGCCGTTC GGGTGATGGC CTACGGCCTG CACCTGGGCG CCCGGCTCCC GGCGCATGCC
ACCTCGACCG GGCGCGTGCT GCTGGCGGCC AAGACCAAAA CGCAATTGAC GCAATGGCTC
AAGGGCCGGA CTCTGGCGCG CCTGACCTCG CACACCCACA TCGACCCCAG GCAGTTCCGC
GCAGTCATCG AGCAGGTCCG CGCCAACGAC TATTGCCTGG CGCAAGAGGA GCATGAACTG
GACGTGCATG CGCTGGCCGT GCCGCTGCGG GACATGCAGG GAAACACGGT GGCGGCGCTC
AATGTGGTCG CATCGCCTCA GCGGCTGACC GCGCAGGACA TCCAGCGCGA CCTGCTGCCG
CTGCTGCTCG ATGCCGCAAG GGAACTGCGC CCCTTGCTTT AA
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| Protein sequence | MSVSRTVSAD RVFPIAKADK IEGMAKGMAV LESFDTQRQR LNATLAAERA GLTRAAARRH
LLTLTHLGYL ETDGSYFWLS AKVLRFSGSY LASARLPRAI QPTLNRLAAQ TRQSFSVAVL
DFDEVVIVGR SGYEWTKSPE GAVRVMAYGL HLGARLPAHA TSTGRVLLAA KTKTQLTQWL
KGRTLARLTS HTHIDPRQFR AVIEQVRAND YCLAQEEHEL DVHALAVPLR DMQGNTVAAL
NVVASPQRLT AQDIQRDLLP LLLDAARELR PLL
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