Gene Pnap_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1868 
Symbolndk 
ID4688707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1992298 
End bp1992723 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content56% 
IMG OID639834875 
Productnucleoside diphosphate kinase 
Protein accessionYP_982099 
Protein GI121604770 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCG AACGCACACT CTCCATCATC AAACCTGACG CAGTCGCCAA AAACGTGATT 
GGCCAAATCT ACGCACGTTT TGAAGCCGCC GGCCTGAAGG TCGTCGCCGC CAAGATGACC
CACCTGTCGC AAGGCGAGGC GGAAGCTTTT TATGCCGTGC ACAAAGAGCG TCCTTTCTTC
AAGGATCTGG TCTCGTTCAT GATTTCCGGC CCGGTGATGA TCCAGGCGCT GGAAGGCGAA
GGCGCTGTGC TGAAAAATCG TGACCTAATG GGCGCGACCG ACCCGAAGAA AGCTGATGCC
GGCACCATTC GCGCCGACTT CGCCGACAGC ATCGATGCCA ATGCCGTTCA TGGCTCCGAC
GCTGTCGAAA CCGCCAGGGA AGAAATCGCT TTCTTCTTTG CGGGCATGAA CGTTTACTCG
CGTTAA
 
Protein sequence
MAIERTLSII KPDAVAKNVI GQIYARFEAA GLKVVAAKMT HLSQGEAEAF YAVHKERPFF 
KDLVSFMISG PVMIQALEGE GAVLKNRDLM GATDPKKADA GTIRADFADS IDANAVHGSD
AVETAREEIA FFFAGMNVYS R