| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1846 |
|---|
| Symbol | |
|---|
| ID | 4689919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1967729 |
|---|
| End bp | 1968745 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639834852 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_982077 |
|---|
| Protein GI | 121604748 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.299705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.40576 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCA ATCAGCAGTT CCTGCTCGAC AACCGGCCCG CCGGCGAAGC CGTCGCCAGC
AATTTCAAGC TCGTCAGCAG CGAAACGCCC CCCTTGCAGG ATGGCCAGGT GCTGGTGCGC
CACCATTATT TGAGCCTGGA CCCCTACATG CGCGGCCGCA TGAGCGACTC CAAGAGCTAC
ACCGCGCCGC AGCCGCTGGG CGAGGTGATG CTGGGCGGCA CCGTCGGCGA AGTGGTCGAA
AGCCGCTCGC CCAGGTTCCA GCCCGGCGAC AAGGTGGTCG GCATGGGCGG CTGGCAGCTC
TACAGCGTGG TGAACGCCGA CGAGCCCGGC GCGCTGCGCA AGGTCGATAC CTCCCATGTG
CCGCTGTCCT ACTACCTGGG CGCCGTCGGC ATGCCCGGCG TCACGGCCTG GTACGGCCTG
GTGAAGATCA TCGAGCCCAA GGCCGGCGAA ACCATGGTCG TGAGTGCCGC GACGGGCGCC
GTCGGCAGTG CTTTTGCCGC CCTGGCCAAG GCGCGCGGCT GCCGCACGGT CGGCATTGCC
GGCGGCCCGG ACAAATGCCG TTACGCGGTG GAAGAACTCG GCTTTGACGC CTGCATCGAC
TACAAGCTGC ACCAGGATGC GGCGTCGCTG TCCAAGGCGC TCAAGGAAGC CTGCCCGGAC
GGCATCGACG GCTACTTTGA AAACGTCGGC GGCATGGTGC TCGATGCGGT GCTGCCGCGC
ATGAACGCAT TTGGCCGGAT TGCCGTGTGC GGCATGATTG CCGGCTACGA CGGCAAGCCC
ATGCCGCTGA CCTGTCCGGC GCTGATTCTG ACCAGCCGGC TCAAGGTGCA GGGCTTTATC
GTCACCGAAC ACATGGACAT CTGGCCCGAA GCGCTGAAGG AACTCGCTGG ACTGGTGGCC
ACGGGCACGC TGCGCCCTCG GGAATCAGTG GCAGAGGGCC TTGAAGCCGC CCCTGAAGCC
TTTTTGGGCC TGCTCAAGGG CAAGAACTTC GGCAAGCAAC TGGTCAAACT CATTTAA
|
|---|
| Protein sequence | MPANQQFLLD NRPAGEAVAS NFKLVSSETP PLQDGQVLVR HHYLSLDPYM RGRMSDSKSY
TAPQPLGEVM LGGTVGEVVE SRSPRFQPGD KVVGMGGWQL YSVVNADEPG ALRKVDTSHV
PLSYYLGAVG MPGVTAWYGL VKIIEPKAGE TMVVSAATGA VGSAFAALAK ARGCRTVGIA
GGPDKCRYAV EELGFDACID YKLHQDAASL SKALKEACPD GIDGYFENVG GMVLDAVLPR
MNAFGRIAVC GMIAGYDGKP MPLTCPALIL TSRLKVQGFI VTEHMDIWPE ALKELAGLVA
TGTLRPRESV AEGLEAAPEA FLGLLKGKNF GKQLVKLI
|
|---|
| |