| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1827 |
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| Symbol | |
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| ID | 4687361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1945960 |
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| End bp | 1946649 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639834833 |
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| Product | OmpW family protein |
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| Protein accession | YP_982058 |
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| Protein GI | 121604729 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.507852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA GGCATTTAAT GCTCGCCAGC CTTGTGGCGG CTTTTGCAGC AGCCCCTGCC
ATGGCGCAGC AAAACACCAT CAAGCTTGGC GTTGCCAATG TGCAGCCCCA TTCCAGCGCC
AGCGACTTTT CCGGACCCTT CACGCCGGGC GGCATCAGCG TCGAAGTGCG CAACAAGACA
ACGTCCTTCT TTTCCTATAC ACGCGAAATC AACGACCAGT GGGATGTGGA ACTCGCCTTG
GGTGACTCGC CTACCCATGA CATTGCCTTG AAAATCAACA ACCCAGGCCT GCCCGCCAGC
GTTCAGTCCA TGTCGGGCCA GGTCGCCGCA ACCGTCCGGC AGGTCGCGCC CGTGCTGTTC
GTCAATTACA AGTTTCTGGA AAAAACCAGT CCCTGGCGGC CATTTGTAGG CGTGGGCATC
AACTACACGA ACTTTGACAA GACCCATTCC ACCGCTGCCG GCGACACCCT CAATGGCGGC
CCGACCTCCG TTTCGCTGGA AGATTCGGTG GGCCTGGCCC TGCAGGGCGG CGTGACTTAC
CGGATCAACA ACCAGTGGTC GCTGTCGGCG GCACTGATAA CAGCGCAGGT CAAATCCAAA
ATCACCACCA ACACCCTGGG CATCGAGCGG AGCGCCGACA TCAAGTTCAG GCCCCGGGTG
TTTACCCTGG CCATGGGCTA TTCGTTTTGA
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| Protein sequence | MKTRHLMLAS LVAAFAAAPA MAQQNTIKLG VANVQPHSSA SDFSGPFTPG GISVEVRNKT
TSFFSYTREI NDQWDVELAL GDSPTHDIAL KINNPGLPAS VQSMSGQVAA TVRQVAPVLF
VNYKFLEKTS PWRPFVGVGI NYTNFDKTHS TAAGDTLNGG PTSVSLEDSV GLALQGGVTY
RINNQWSLSA ALITAQVKSK ITTNTLGIER SADIKFRPRV FTLAMGYSF
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