| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1807 |
|---|
| Symbol | |
|---|
| ID | 4689328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1918679 |
|---|
| End bp | 1919200 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639834813 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_982038 |
|---|
| Protein GI | 121604709 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.739006 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTG CCCTGCACCT GGCCGCTGAC GATGCGGCGC TTGAAGCGGC CGTCAAGCGC
AGCCGCAAAT TGCTCAACAA GCGGGCGCTG GTTGCCGCCG TCGCCAGCGC GGTGCCGGTG
CCCGGCCTGG ACTGGGCGGT GGATGCCGCG CTGCTGTCCA GGCTGATTCC CCAGATCAAC
AGGGAATTCG GCCTGGCGCC CGAGCAGATC GACCAGCTGG ACCCGAAAAA ACGCGAACAG
GTGCAAAAAG CCGTGGCCAT GGTCGGCTCG GTGCTGATCG GCAAGTTCAT CAGCCGCGAC
CTGATCATCA AGGCCACCAC CAAGATCGGC ACGCGCATGG CGACCAAACA GCTCGCCAAG
TACGTGCCGC TGGCCGGACA GATCGTGGCG GCCACCGTGG GCTATGCGGC CATCCGCTAC
TTTGGCGAGG AGCACATGAA GGACTGCATC CGGGTGGCCA GGCAGGCGCA GCTCATACCA
ATCCCGACAG AGAAAGAACC AAAGTCAGTG ATCGGAGTCT GA
|
|---|
| Protein sequence | MPTALHLAAD DAALEAAVKR SRKLLNKRAL VAAVASAVPV PGLDWAVDAA LLSRLIPQIN
REFGLAPEQI DQLDPKKREQ VQKAVAMVGS VLIGKFISRD LIIKATTKIG TRMATKQLAK
YVPLAGQIVA ATVGYAAIRY FGEEHMKDCI RVARQAQLIP IPTEKEPKSV IGV
|
|---|
| |